Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is ywhH [H]

Identifier: 51892463

GI number: 51892463

Start: 1468880

End: 1469314

Strand: Reverse

Name: ywhH [H]

Synonym: STH1325

Alternate gene names: 51892463

Gene position: 1469314-1468880 (Counterclockwise)

Preceding gene: 51892468

Following gene: 51892462

Centisome position: 41.2

GC content: 73.56

Gene sequence:

>435_bases
GTGGAGGGCGAGATCCGGCTGTTCGGCAAGCTGCTCACCACAGCCCAGGCGGCTGCGGACGCACTCGGCGTGGACCTCGG
CCGCATCGCCAAGTCCGTCCTGATGTTCGCCGGGGGCGAGCCGGTGCTGGTGGTGGCGGCCGGCGACCGGCGGGTGGACC
GCAGGAAGGTCCGGGACCGGCTCAACCGGGGCAAGGTGACCCTGGCCGGGCCGGAGGAAGTGCTGGCGGTGACGGGATTC
GTGGCCGGCGGGGTCGCCCCCGTGGGGGCCCTGCATCCGGTGACGGTGCTCCTGGACGAGAGCCTCCGCCGCTTTCCGGA
CATCTGGGCGGGCGGAGGCGTTCCTGAGGCGCTGCTCCGGATCCGGGTGGACGACCTGCCCCGCGCCACCGGAGGGGTCT
TCGCGGACGTCGTGCAGGATCCGGCTCCGGCATAG

Upstream 100 bases:

>100_bases
GGCCCGGTGGCAAAACATGGGAGGGGATGACTTGACGCAGACAACACCGGTTGAACCCGAACCGATCGCACGGGTGCGCG
CGGCGCTGCGGGCCGCCGGG

Downstream 100 bases:

>100_bases
CCGTTCGGCCCCGCCGTATCCTTTTTCCCCCGCCGTGCGGGGTACCGGGTGAGCGGACACGACGGGAGGGATCGGACGAT
GGAGAACGTCCGAAGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDRLNRGKVTLAGPEEVLAVTGF
VAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLRIRVDDLPRATGGVFADVVQDPAPA

Sequences:

>Translated_144_residues
MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDRLNRGKVTLAGPEEVLAVTGF
VAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLRIRVDDLPRATGGVFADVVQDPAPA
>Mature_144_residues
MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDRLNRGKVTLAGPEEVLAVTGF
VAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLRIRVDDLPRATGGVFADVVQDPAPA

Specific function: Unknown

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 15042; Mature: 15042

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDR
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
LNRGKVTLAGPEEVLAVTGFVAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLR
HHCCCEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IRVDDLPRATGGVFADVVQDPAPA
HHHCCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDR
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
LNRGKVTLAGPEEVLAVTGFVAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLR
HHCCCEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IRVDDLPRATGGVFADVVQDPAPA
HHHCCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]