| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is ywhH [H]
Identifier: 51892463
GI number: 51892463
Start: 1468880
End: 1469314
Strand: Reverse
Name: ywhH [H]
Synonym: STH1325
Alternate gene names: 51892463
Gene position: 1469314-1468880 (Counterclockwise)
Preceding gene: 51892468
Following gene: 51892462
Centisome position: 41.2
GC content: 73.56
Gene sequence:
>435_bases GTGGAGGGCGAGATCCGGCTGTTCGGCAAGCTGCTCACCACAGCCCAGGCGGCTGCGGACGCACTCGGCGTGGACCTCGG CCGCATCGCCAAGTCCGTCCTGATGTTCGCCGGGGGCGAGCCGGTGCTGGTGGTGGCGGCCGGCGACCGGCGGGTGGACC GCAGGAAGGTCCGGGACCGGCTCAACCGGGGCAAGGTGACCCTGGCCGGGCCGGAGGAAGTGCTGGCGGTGACGGGATTC GTGGCCGGCGGGGTCGCCCCCGTGGGGGCCCTGCATCCGGTGACGGTGCTCCTGGACGAGAGCCTCCGCCGCTTTCCGGA CATCTGGGCGGGCGGAGGCGTTCCTGAGGCGCTGCTCCGGATCCGGGTGGACGACCTGCCCCGCGCCACCGGAGGGGTCT TCGCGGACGTCGTGCAGGATCCGGCTCCGGCATAG
Upstream 100 bases:
>100_bases GGCCCGGTGGCAAAACATGGGAGGGGATGACTTGACGCAGACAACACCGGTTGAACCCGAACCGATCGCACGGGTGCGCG CGGCGCTGCGGGCCGCCGGG
Downstream 100 bases:
>100_bases CCGTTCGGCCCCGCCGTATCCTTTTTCCCCCGCCGTGCGGGGTACCGGGTGAGCGGACACGACGGGAGGGATCGGACGAT GGAGAACGTCCGAAGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDRLNRGKVTLAGPEEVLAVTGF VAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLRIRVDDLPRATGGVFADVVQDPAPA
Sequences:
>Translated_144_residues MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDRLNRGKVTLAGPEEVLAVTGF VAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLRIRVDDLPRATGGVFADVVQDPAPA >Mature_144_residues MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDRLNRGKVTLAGPEEVLAVTGF VAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLRIRVDDLPRATGGVFADVVQDPAPA
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007214 [H]
Pfam domain/function: PF04073 YbaK [H]
EC number: NA
Molecular weight: Translated: 15042; Mature: 15042
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDR CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH LNRGKVTLAGPEEVLAVTGFVAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLR HHCCCEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH IRVDDLPRATGGVFADVVQDPAPA HHHCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure MEGEIRLFGKLLTTAQAAADALGVDLGRIAKSVLMFAGGEPVLVVAAGDRRVDRRKVRDR CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH LNRGKVTLAGPEEVLAVTGFVAGGVAPVGALHPVTVLLDESLRRFPDIWAGGGVPEALLR HHCCCEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH IRVDDLPRATGGVFADVVQDPAPA HHHCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]