| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is korA [H]
Identifier: 51892455
GI number: 51892455
Start: 1459745
End: 1461574
Strand: Reverse
Name: korA [H]
Synonym: STH1317
Alternate gene names: 51892455
Gene position: 1461574-1459745 (Counterclockwise)
Preceding gene: 51892458
Following gene: 51892454
Centisome position: 40.98
GC content: 68.96
Gene sequence:
>1830_bases TTGCTTAAGGAGGTTTGCTGGCAGATCGGCGGCGAGCAGGGGTCCGGCCTTGACTCCACGGCCGAGGTCTTCAACACGGT TGCCAGCCGCGCGGGGTACTACGTGTACGCCTACAAGACCTTCGCATCCCGCATCAAGGGCGGACACACCGACTTTACCA CGCGCATTTCCGTCGAGCGGGTCCAGGCGCCGGCCTCCGGCGTCAACCTGCTGGTGGTGCTGGACCAGGAGTCCATCGAC CTCTGCGCCAAGAACGTCTACCCCGGCGCCATCATCCTGGCGGAGGAGTCCTTCGAGCCCAAGCTGCCGGAGGGCATCGA CGCCCGGCTGCTGACCATGCCGTTTAATAAGATGGCGCTGGCGCTGGGCAACACGCTCATGAAGAACAACCTGGTCCTGG GCGCCTCGGCCGCGCTGCTGGGCCTGCCGCTGGAGGGCTTCAAGGCCTACGCGCAGCGCCGGTGGGGAACCCGCGGGGCG GAGTTCGTCGCCCTCATCCACCAGGCCATGGACCAGGGCTACCAGTACGTGGAGGAGCACTGGCCCGAGCTCAAGCTCGA TCTGGCCAAGCCTGACGGCCAGGAGAAGCTGCTCATGACCGGCAACGACGCGGTCGCCCTCGGGGCGCTCGCCGGCGGCT GCCGCCTGATGTTCTCCTACCCGATCACGCCGGCCTCCGAGATCGCCGAGAACCTGGTCAAGGCCTTCCCGAAGGTGGGC GGCGTGGCCGTGCAGATGGAGGACGAGCTGGGCTCCATCGTGGCCTGCGTCGGCGCCGGTTTCGCCGGGGCCCGGGTCAT GACCGCGACCTCCGGCCCGGGCATCTCGCTGATGCAGGAGGCCATCGGCCTCGCGTCGATGACCGAGACGCCGGTGGTCG TGGTCGACACCCAGCGCGGCGGCCCCTCCACGGGCATGCCCACCAAGCAGGAGCAGTCCGACCTGCTGGCCCTGGCCTAC GGCGGCCACGGCGAGGGCCCGCGCATCGTCCTGGCCCCCGGCTCCGTGGAAGAGCTCATCCCCATGACCGCCGAGGCCTT CAACCTGGCGGACAACTACCACTGCCCGGTGCTGATCGCCTCTGACCTGGCCCTGGCCCTGTTCCAGCAGACCGTTGAGC CGACGGCGGTCGACCTCAGCAACCTGCCCAAGATCGACCGCGGCCCCATCGCCGACCCGCAGGAGCTGGCGGCCTTGGGG CGCGACGTGTTCGAACGGTACAGCAAGCAGGTCAACGAGAACGGCGTGTCGCCCCGCTCGCTGCCCGGCATGAAGAACGG CCAGTTCCTGGCCACCGGCGCCGAGCACGGGCCGATGGGCAAGGTCACCGAGAACCCCGCCAACCGGGTCTACATGATGG ACCGCCGCCTGCGCCGGCTGCACCACGTGAAGACCGAGGCGGTACGCTACTTCGGCAGCCCGAACGCCGACCTCGTGCTG CTCGCCTTCGGCACCACCCTCGGGGCGGCGAAGGAGGCCCAGCCGATCATCGAGGAGATGACCGGCAAGAAGGTCGGCGT GCTGCAGGTCCGGTTGATCTACCCGGTGCCCGTGGCGGAGATCGCCAGGCATGTGGGCAACGCCACCGCGCTCGTGGTCG AATCCAACGCCACGGGGCAGTTCGCCTTCATGCTGAAGGGGTCCGGCTACGACCAGGAGAAGGTCGCGAGCCTGCTGAAG TACGACGGCACCCTCTTCACGGTGAAGGAGATCGTGGACGGCGCCCGGGCGGTGCTGGCCGGCGAGGCCCGGTACCTGGT GACCGGCGGCGGCCAGGGCGTGCGGCCCACCGATGACCCGACCATCGCGCTGACGGCGAAGGAGGCGTAA
Upstream 100 bases:
>100_bases GTTGGAAGTGGGAAGCAATCGACCGTCGGCAGCAACCATCGATCCGGGGCAGGCACAATGGCCTGCACACGGAGTATGCC GCTTTGAGGAGGGGAACAGG
Downstream 100 bases:
>100_bases GCGAAATGGCAGTGACCATGGCGGATTTCCGGACGTCCGAGAAGTCCTGGTGGTGCCCGGGCTGCGGCGACTTCGGCGTC CTGGCGGCCCTGCAGAAGGC
Product: 2-oxoacid:ferredoxin oxidoreductase alpha subunit
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MLKEVCWQIGGEQGSGLDSTAEVFNTVASRAGYYVYAYKTFASRIKGGHTDFTTRISVERVQAPASGVNLLVVLDQESID LCAKNVYPGAIILAEESFEPKLPEGIDARLLTMPFNKMALALGNTLMKNNLVLGASAALLGLPLEGFKAYAQRRWGTRGA EFVALIHQAMDQGYQYVEEHWPELKLDLAKPDGQEKLLMTGNDAVALGALAGGCRLMFSYPITPASEIAENLVKAFPKVG GVAVQMEDELGSIVACVGAGFAGARVMTATSGPGISLMQEAIGLASMTETPVVVVDTQRGGPSTGMPTKQEQSDLLALAY GGHGEGPRIVLAPGSVEELIPMTAEAFNLADNYHCPVLIASDLALALFQQTVEPTAVDLSNLPKIDRGPIADPQELAALG RDVFERYSKQVNENGVSPRSLPGMKNGQFLATGAEHGPMGKVTENPANRVYMMDRRLRRLHHVKTEAVRYFGSPNADLVL LAFGTTLGAAKEAQPIIEEMTGKKVGVLQVRLIYPVPVAEIARHVGNATALVVESNATGQFAFMLKGSGYDQEKVASLLK YDGTLFTVKEIVDGARAVLAGEARYLVTGGGQGVRPTDDPTIALTAKEA
Sequences:
>Translated_609_residues MLKEVCWQIGGEQGSGLDSTAEVFNTVASRAGYYVYAYKTFASRIKGGHTDFTTRISVERVQAPASGVNLLVVLDQESID LCAKNVYPGAIILAEESFEPKLPEGIDARLLTMPFNKMALALGNTLMKNNLVLGASAALLGLPLEGFKAYAQRRWGTRGA EFVALIHQAMDQGYQYVEEHWPELKLDLAKPDGQEKLLMTGNDAVALGALAGGCRLMFSYPITPASEIAENLVKAFPKVG GVAVQMEDELGSIVACVGAGFAGARVMTATSGPGISLMQEAIGLASMTETPVVVVDTQRGGPSTGMPTKQEQSDLLALAY GGHGEGPRIVLAPGSVEELIPMTAEAFNLADNYHCPVLIASDLALALFQQTVEPTAVDLSNLPKIDRGPIADPQELAALG RDVFERYSKQVNENGVSPRSLPGMKNGQFLATGAEHGPMGKVTENPANRVYMMDRRLRRLHHVKTEAVRYFGSPNADLVL LAFGTTLGAAKEAQPIIEEMTGKKVGVLQVRLIYPVPVAEIARHVGNATALVVESNATGQFAFMLKGSGYDQEKVASLLK YDGTLFTVKEIVDGARAVLAGEARYLVTGGGQGVRPTDDPTIALTAKEA >Mature_609_residues MLKEVCWQIGGEQGSGLDSTAEVFNTVASRAGYYVYAYKTFASRIKGGHTDFTTRISVERVQAPASGVNLLVVLDQESID LCAKNVYPGAIILAEESFEPKLPEGIDARLLTMPFNKMALALGNTLMKNNLVLGASAALLGLPLEGFKAYAQRRWGTRGA EFVALIHQAMDQGYQYVEEHWPELKLDLAKPDGQEKLLMTGNDAVALGALAGGCRLMFSYPITPASEIAENLVKAFPKVG GVAVQMEDELGSIVACVGAGFAGARVMTATSGPGISLMQEAIGLASMTETPVVVVDTQRGGPSTGMPTKQEQSDLLALAY GGHGEGPRIVLAPGSVEELIPMTAEAFNLADNYHCPVLIASDLALALFQQTVEPTAVDLSNLPKIDRGPIADPQELAALG RDVFERYSKQVNENGVSPRSLPGMKNGQFLATGAEHGPMGKVTENPANRVYMMDRRLRRLHHVKTEAVRYFGSPNADLVL LAFGTTLGAAKEAQPIIEEMTGKKVGVLQVRLIYPVPVAEIARHVGNATALVVESNATGQFAFMLKGSGYDQEKVASLLK YDGTLFTVKEIVDGARAVLAGEARYLVTGGGQGVRPTDDPTIALTAKEA
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 64879; Mature: 64879
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKEVCWQIGGEQGSGLDSTAEVFNTVASRAGYYVYAYKTFASRIKGGHTDFTTRISVER CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCCCEEEEEEHHH VQAPASGVNLLVVLDQESIDLCAKNVYPGAIILAEESFEPKLPEGIDARLLTMPFNKMAL HCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHH ALGNTLMKNNLVLGASAALLGLPLEGFKAYAQRRWGTRGAEFVALIHQAMDQGYQYVEEH HHCCHHHHCCEEEECCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC WPELKLDLAKPDGQEKLLMTGNDAVALGALAGGCRLMFSYPITPASEIAENLVKAFPKVG CCCEEEEECCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCC GVAVQMEDELGSIVACVGAGFAGARVMTATSGPGISLMQEAIGLASMTETPVVVVDTQRG CEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCCC GPSTGMPTKQEQSDLLALAYGGHGEGPRIVLAPGSVEELIPMTAEAFNLADNYHCPVLIA CCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHCCHHHHHHCCCCCCCCEEEH SDLALALFQQTVEPTAVDLSNLPKIDRGPIADPQELAALGRDVFERYSKQVNENGVSPRS HHHHHHHHHHHCCCCEECHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC LPGMKNGQFLATGAEHGPMGKVTENPANRVYMMDRRLRRLHHVKTEAVRYFGSPNADLVL CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LAFGTTLGAAKEAQPIIEEMTGKKVGVLQVRLIYPVPVAEIARHVGNATALVVESNATGQ EEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHCCCEEEEEEECCCCCE FAFMLKGSGYDQEKVASLLKYDGTLFTVKEIVDGARAVLAGEARYLVTGGGQGVRPTDDP EEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHCCHHEEEECCCEEEEECCCCCCCCCCCC TIALTAKEA EEEEEECCC >Mature Secondary Structure MLKEVCWQIGGEQGSGLDSTAEVFNTVASRAGYYVYAYKTFASRIKGGHTDFTTRISVER CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCCCEEEEEEHHH VQAPASGVNLLVVLDQESIDLCAKNVYPGAIILAEESFEPKLPEGIDARLLTMPFNKMAL HCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHH ALGNTLMKNNLVLGASAALLGLPLEGFKAYAQRRWGTRGAEFVALIHQAMDQGYQYVEEH HHCCHHHHCCEEEECCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC WPELKLDLAKPDGQEKLLMTGNDAVALGALAGGCRLMFSYPITPASEIAENLVKAFPKVG CCCEEEEECCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCC GVAVQMEDELGSIVACVGAGFAGARVMTATSGPGISLMQEAIGLASMTETPVVVVDTQRG CEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCCC GPSTGMPTKQEQSDLLALAYGGHGEGPRIVLAPGSVEELIPMTAEAFNLADNYHCPVLIA CCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHCCHHHHHHCCCCCCCCEEEH SDLALALFQQTVEPTAVDLSNLPKIDRGPIADPQELAALGRDVFERYSKQVNENGVSPRS HHHHHHHHHHHCCCCEECHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC LPGMKNGQFLATGAEHGPMGKVTENPANRVYMMDRRLRRLHHVKTEAVRYFGSPNADLVL CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LAFGTTLGAAKEAQPIIEEMTGKKVGVLQVRLIYPVPVAEIARHVGNATALVVESNATGQ EEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHCCCEEEEEEECCCCCE FAFMLKGSGYDQEKVASLLKYDGTLFTVKEIVDGARAVLAGEARYLVTGGGQGVRPTDDP EEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHCCHHEEEECCCEEEEECCCCCCCCCCCC TIALTAKEA EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]