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The map label for this gene is 51892438

Identifier: 51892438

GI number: 51892438

Start: 1436693

End: 1437097

Strand: Reverse

Name: 51892438

Synonym: STH1300

Alternate gene names: NA

Gene position: 1437097-1436693 (Counterclockwise)

Preceding gene: 51892439

Following gene: 51892433

Centisome position: 40.3

GC content: 58.02

Gene sequence:

>405_bases
ATGTATGCGGCCGGTTTGTCCATCTCTGAGATCGCCCGCCGCACCGGAAGGGACCGCAAGACCATCCGTAAGTGGCTACG
CACAAACGCCATGCCCAAGCCGGCGAAGCGTAAGCGCTCCAGCATGTTAGACCAGCACAAGGCGTTCATTCTGGAGCAGA
TGCAGAAGGGTGTCACAAACGCATCAAAGATGCTCTATCTACTGCAGCAGCGGGGCTTCAAAGGCAAGATTCGGATTGTC
CGGGCATTCATGGCGCCTTATCGGCCCATGGCCAAGGCTGCGGCTACCGTGCGGTTCGAAACACCGCCGGGAAAGCAGGC
GCAGGTGGACTGGGCCGACTTTGGGTACATCGAGGTAGACGGTCGCCGGCTCAAGCTCTACTGCTTCATCATGGTTTGTG
TTTGA

Upstream 100 bases:

>100_bases
AGATAAAATTCCCCACCCCTAGAACATATCGGGCATCTCAACCTGGCCAGTTGGAGGTGCCTGTATGTTAAGGAGTGGGG
AAACTTTGGAAATCAGGCAG

Downstream 100 bases:

>100_bases
TCAAGTGCGTATTCCGGTCAAATCGACCAGTGATTCCGGTTCAAGCCGACCACCGGTTCTGATCCAAGTCGACCGCCGTT
TCCGATTTCATCCGGCCAGC

Product: transposase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MYAAGLSISEIARRTGRDRKTIRKWLRTNAMPKPAKRKRSSMLDQHKAFILEQMQKGVTNASKMLYLLQQRGFKGKIRIV
RAFMAPYRPMAKAAATVRFETPPGKQAQVDWADFGYIEVDGRRLKLYCFIMVCV

Sequences:

>Translated_134_residues
MYAAGLSISEIARRTGRDRKTIRKWLRTNAMPKPAKRKRSSMLDQHKAFILEQMQKGVTNASKMLYLLQQRGFKGKIRIV
RAFMAPYRPMAKAAATVRFETPPGKQAQVDWADFGYIEVDGRRLKLYCFIMVCV
>Mature_134_residues
MYAAGLSISEIARRTGRDRKTIRKWLRTNAMPKPAKRKRSSMLDQHKAFILEQMQKGVTNASKMLYLLQQRGFKGKIRIV
RAFMAPYRPMAKAAATVRFETPPGKQAQVDWADFGYIEVDGRRLKLYCFIMVCV

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR006120
- InterPro:   IPR012337 [H]

Pfam domain/function: PF02796 HTH_7; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 15474; Mature: 15474

Theoretical pI: Translated: 11.37; Mature: 11.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAAGLSISEIARRTGRDRKTIRKWLRTNAMPKPAKRKRSSMLDQHKAFILEQMQKGVTN
CCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
ASKMLYLLQQRGFKGKIRIVRAFMAPYRPMAKAAATVRFETPPGKQAQVDWADFGYIEVD
HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCEECCCCCCEEEEC
GRRLKLYCFIMVCV
CCEEEEEEEEEEEC
>Mature Secondary Structure
MYAAGLSISEIARRTGRDRKTIRKWLRTNAMPKPAKRKRSSMLDQHKAFILEQMQKGVTN
CCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
ASKMLYLLQQRGFKGKIRIVRAFMAPYRPMAKAAATVRFETPPGKQAQVDWADFGYIEVD
HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCEECCCCCCEEEEC
GRRLKLYCFIMVCV
CCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]