Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892393

Identifier: 51892393

GI number: 51892393

Start: 1391935

End: 1393725

Strand: Reverse

Name: 51892393

Synonym: STH1255

Alternate gene names: NA

Gene position: 1393725-1391935 (Counterclockwise)

Preceding gene: 51892410

Following gene: 51892390

Centisome position: 39.08

GC content: 73.26

Gene sequence:

>1791_bases
ATGTCCTTCGTTGAACATACCACCGGGGGCCCGCGAAATCAAGGGGGCTGGAGCAGAGGCGCGTTACCTTCCGGCGTCGG
CGGCGTTTATCCCGGTAGAGGAACGCCCCCGCGCCTGGAAGCGCAGGCCCGATGCGGATGGGCCGCACCGGCGGGGGCGG
GGGAGGTTGGAATCATGCTGAGGGTACGGAAGTGGCCCATCGCAGCGCTGGTGCTGGCTGCGCTGCTTTCCGCCTGCAGC
GCGGGAGCCGGCTCGCCTGCCGGGGAGACGGACGCGGGCAGCGCCCCCGCCGGTTCGGGGGCACCGGCCGGAGACACCGC
GCCGGGCGCTTTACCCGCCGTCCTGGCGGAGCAGGTGACGGACGGGCTGGTCCGCATCGCGTTCGCCGCCGGCGACACCA
TCGACCGGCCGGGGATCTACCTGCTCGACACCGCCACCGGCCAGGGTGAGGGCTGGCTGCCGCCGCCGGAGGATGACTGG
ACCTACTTCTTCGGGCAGGTCACCGACGACAACCGGTTCCTCATCGGCACGGCGTATCAGGAGGACGACGGGTACATCGT
CGACCGGCAGACCGGCGCCATGTGGCGGTGGGACGCGTCCCGCTACCGACTCCTGCTGGCCGCCGAGCAGGGGTTCCTGT
TCGCGGAGCTGGCGGAGGAGCCGGACGGCTTCCGGGACGAGACCGGCCGCCTGATCTGGACCGGGCCGGACCTGCGGGTG
CGGCACACCTTCGTCCTGGCGGATCCCGTGCGCTCCGCCGTCCTGGCGCCCGACGGCCGCCGGGCGGCCATCCTCCTGTC
CCGGGGCGAGGTCATCGCGCTTGACCTGGAGAGCGGCGCCGCCGTGACGCTGGCCGACCTGCAGCTCGGCCCCGACGCCT
GGCCGGCGATGGCGCCCTTCGACGACCTGCTGCAGGTCGCTGTGGAGATCCCGGACGATCAGGCGCCGCCCGCCGCGCAG
CCGCACCGGCTGGTCCGGCTGGACTGGGACGGTACGGTGATCGCCGACCTGAGGGCGCCGGGTTATCCCCTCACCTTCTC
GCCCGACGGGCGGTGGATGACCTGGGTGGAGTGGCCGGTGGACCGGCTGGCCCCCGTGACGGTGGTGGCGGACGCCTGGA
CGCTGGAGCCCGGGCTCCGGGCGTTCGGCGTCACCACGTGCTTCCCCGCGGTGGGCAGCGGGGGCGCCCGCTGGCTGAGC
GACGGCTCCGGGCTGGTGGTGCATTCGTCGGATGGATACCGCCTCCTCACGCCGGCCGGTGAACTGCGGGCCCTCCCGGC
GTTTTCCGGTCAGGACTGGAAGGGTGAACCGCAGCCTGCGCCGGATGACCCGGACCTGTTCGCCCTGGGGCGCATCGCCG
TCTCCGACGGGGCGGGCACGGACCAGATGGGCATCACGCTGGAGGGGTTCGTCACACCGTACGGGCACGTGAACCCGTGG
GGCCGGGACAGCGCGGTGCTGCGGTTCGTCCTGCCGCCCAAGCCCGGCGGCGGAATGTGCGAGGAGCGGCCGCCGATGGA
GACGGCCGTCCAGGTGCAGGCGGGCCCCATCCCCGAATTCCCGCTGGTCGTCGCCGGGGTGGAGGGTTGCCTCCCCCTCA
TCCCCCGCGAGTTCGGCACGGGTGAGGCCTGCCTCCCCAACGGGACCCGGCTCGTCCCGTACCGCCCCCGGTCGGACGTG
CCGGCCCTGGGCTGGTACGCGGACGCCTGGCGCCTCTGGGTGCGGACGGAGGACGGACAGATCGGGGAGATCTCGCTGGA
GGGCACCCCACTGCGCTGGGCGCTGGACTGA

Upstream 100 bases:

>100_bases
GTCTCACACTGCGCCCAGGCGCGGCAAGGGCCGCGCGCGTCAGGGCCTGCGGTCCAGTATGGTGCTCCTTACCAGCCTCA
CGGGACTGGGTTAAAGCAGC

Downstream 100 bases:

>100_bases
CGACCCCGGGTCGTATGTACGGCGCGGCCCCCACCACGGGGGCCGCGCCCTCTACATGAGGAACTGCTTGATCTCCTCCG
CGCTGTACCCGATCTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MSFVEHTTGGPRNQGGWSRGALPSGVGGVYPGRGTPPRLEAQARCGWAAPAGAGEVGIMLRVRKWPIAALVLAALLSACS
AGAGSPAGETDAGSAPAGSGAPAGDTAPGALPAVLAEQVTDGLVRIAFAAGDTIDRPGIYLLDTATGQGEGWLPPPEDDW
TYFFGQVTDDNRFLIGTAYQEDDGYIVDRQTGAMWRWDASRYRLLLAAEQGFLFAELAEEPDGFRDETGRLIWTGPDLRV
RHTFVLADPVRSAVLAPDGRRAAILLSRGEVIALDLESGAAVTLADLQLGPDAWPAMAPFDDLLQVAVEIPDDQAPPAAQ
PHRLVRLDWDGTVIADLRAPGYPLTFSPDGRWMTWVEWPVDRLAPVTVVADAWTLEPGLRAFGVTTCFPAVGSGGARWLS
DGSGLVVHSSDGYRLLTPAGELRALPAFSGQDWKGEPQPAPDDPDLFALGRIAVSDGAGTDQMGITLEGFVTPYGHVNPW
GRDSAVLRFVLPPKPGGGMCEERPPMETAVQVQAGPIPEFPLVVAGVEGCLPLIPREFGTGEACLPNGTRLVPYRPRSDV
PALGWYADAWRLWVRTEDGQIGEISLEGTPLRWALD

Sequences:

>Translated_596_residues
MSFVEHTTGGPRNQGGWSRGALPSGVGGVYPGRGTPPRLEAQARCGWAAPAGAGEVGIMLRVRKWPIAALVLAALLSACS
AGAGSPAGETDAGSAPAGSGAPAGDTAPGALPAVLAEQVTDGLVRIAFAAGDTIDRPGIYLLDTATGQGEGWLPPPEDDW
TYFFGQVTDDNRFLIGTAYQEDDGYIVDRQTGAMWRWDASRYRLLLAAEQGFLFAELAEEPDGFRDETGRLIWTGPDLRV
RHTFVLADPVRSAVLAPDGRRAAILLSRGEVIALDLESGAAVTLADLQLGPDAWPAMAPFDDLLQVAVEIPDDQAPPAAQ
PHRLVRLDWDGTVIADLRAPGYPLTFSPDGRWMTWVEWPVDRLAPVTVVADAWTLEPGLRAFGVTTCFPAVGSGGARWLS
DGSGLVVHSSDGYRLLTPAGELRALPAFSGQDWKGEPQPAPDDPDLFALGRIAVSDGAGTDQMGITLEGFVTPYGHVNPW
GRDSAVLRFVLPPKPGGGMCEERPPMETAVQVQAGPIPEFPLVVAGVEGCLPLIPREFGTGEACLPNGTRLVPYRPRSDV
PALGWYADAWRLWVRTEDGQIGEISLEGTPLRWALD
>Mature_595_residues
SFVEHTTGGPRNQGGWSRGALPSGVGGVYPGRGTPPRLEAQARCGWAAPAGAGEVGIMLRVRKWPIAALVLAALLSACSA
GAGSPAGETDAGSAPAGSGAPAGDTAPGALPAVLAEQVTDGLVRIAFAAGDTIDRPGIYLLDTATGQGEGWLPPPEDDWT
YFFGQVTDDNRFLIGTAYQEDDGYIVDRQTGAMWRWDASRYRLLLAAEQGFLFAELAEEPDGFRDETGRLIWTGPDLRVR
HTFVLADPVRSAVLAPDGRRAAILLSRGEVIALDLESGAAVTLADLQLGPDAWPAMAPFDDLLQVAVEIPDDQAPPAAQP
HRLVRLDWDGTVIADLRAPGYPLTFSPDGRWMTWVEWPVDRLAPVTVVADAWTLEPGLRAFGVTTCFPAVGSGGARWLSD
GSGLVVHSSDGYRLLTPAGELRALPAFSGQDWKGEPQPAPDDPDLFALGRIAVSDGAGTDQMGITLEGFVTPYGHVNPWG
RDSAVLRFVLPPKPGGGMCEERPPMETAVQVQAGPIPEFPLVVAGVEGCLPLIPREFGTGEACLPNGTRLVPYRPRSDVP
ALGWYADAWRLWVRTEDGQIGEISLEGTPLRWALD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63280; Mature: 63149

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVEHTTGGPRNQGGWSRGALPSGVGGVYPGRGTPPRLEAQARCGWAAPAGAGEVGIML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEE
RVRKWPIAALVLAALLSACSAGAGSPAGETDAGSAPAGSGAPAGDTAPGALPAVLAEQVT
EEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DGLVRIAFAAGDTIDRPGIYLLDTATGQGEGWLPPPEDDWTYFFGQVTDDNRFLIGTAYQ
CCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEE
EDDGYIVDRQTGAMWRWDASRYRLLLAAEQGFLFAELAEEPDGFRDETGRLIWTGPDLRV
CCCCEEEECCCCCEEEECCCCEEEEEEECCCCEEEEHHCCCCCCCCCCCEEEEECCCCEE
RHTFVLADPVRSAVLAPDGRRAAILLSRGEVIALDLESGAAVTLADLQLGPDAWPAMAPF
EEEEEEECCHHHHEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEEEECCCCCCCCCCH
DDLLQVAVEIPDDQAPPAAQPHRLVRLDWDGTVIADLRAPGYPLTFSPDGRWMTWVEWPV
HHHHHHEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCEEECCCCCEEEEEECCH
DRLAPVTVVADAWTLEPGLRAFGVTTCFPAVGSGGARWLSDGSGLVVHSSDGYRLLTPAG
HHCCCEEEEEECEECCCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCEEECCCC
ELRALPAFSGQDWKGEPQPAPDDPDLFALGRIAVSDGAGTDQMGITLEGFVTPYGHVNPW
CCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCC
GRDSAVLRFVLPPKPGGGMCEERPPMETAVQVQAGPIPEFPLVVAGVEGCLPLIPREFGT
CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHCCCCCCC
GEACLPNGTRLVPYRPRSDVPALGWYADAWRLWVRTEDGQIGEISLEGTPLRWALD
CCEECCCCCEEEEECCCCCCCCCCEEECEEEEEEEECCCCEEEEEECCCCEEEEEC
>Mature Secondary Structure 
SFVEHTTGGPRNQGGWSRGALPSGVGGVYPGRGTPPRLEAQARCGWAAPAGAGEVGIML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEE
RVRKWPIAALVLAALLSACSAGAGSPAGETDAGSAPAGSGAPAGDTAPGALPAVLAEQVT
EEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DGLVRIAFAAGDTIDRPGIYLLDTATGQGEGWLPPPEDDWTYFFGQVTDDNRFLIGTAYQ
CCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEE
EDDGYIVDRQTGAMWRWDASRYRLLLAAEQGFLFAELAEEPDGFRDETGRLIWTGPDLRV
CCCCEEEECCCCCEEEECCCCEEEEEEECCCCEEEEHHCCCCCCCCCCCEEEEECCCCEE
RHTFVLADPVRSAVLAPDGRRAAILLSRGEVIALDLESGAAVTLADLQLGPDAWPAMAPF
EEEEEEECCHHHHEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEEEECCCCCCCCCCH
DDLLQVAVEIPDDQAPPAAQPHRLVRLDWDGTVIADLRAPGYPLTFSPDGRWMTWVEWPV
HHHHHHEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCEEECCCCCEEEEEECCH
DRLAPVTVVADAWTLEPGLRAFGVTTCFPAVGSGGARWLSDGSGLVVHSSDGYRLLTPAG
HHCCCEEEEEECEECCCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCEEECCCC
ELRALPAFSGQDWKGEPQPAPDDPDLFALGRIAVSDGAGTDQMGITLEGFVTPYGHVNPW
CCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCC
GRDSAVLRFVLPPKPGGGMCEERPPMETAVQVQAGPIPEFPLVVAGVEGCLPLIPREFGT
CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHCCCCCCC
GEACLPNGTRLVPYRPRSDVPALGWYADAWRLWVRTEDGQIGEISLEGTPLRWALD
CCEECCCCCEEEEECCCCCCCCCCEEECEEEEEEEECCCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA