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The map label for this gene is agaC [H]

Identifier: 51892386

GI number: 51892386

Start: 1385933

End: 1386736

Strand: Reverse

Name: agaC [H]

Synonym: STH1248

Alternate gene names: 51892386

Gene position: 1386736-1385933 (Counterclockwise)

Preceding gene: 51892387

Following gene: 51892385

Centisome position: 38.89

GC content: 66.67

Gene sequence:

>804_bases
ATGAGCTTTGAGATCACGGCCCTGCAGATCATCCTGGTCTTCATCGTCACCTTCATCGCCGCGATCGACCAGTTCAACTT
CCTGGAGTCGCTGTATCAGCCCATCGTGACCGGCGCGGTGATCGGCGCCATCCTGGGGGATGTGAGGACCGGGCTGATCG
TCGGCGGCACCTACCAGCTGATGACCATCGGCAACATGCCGATCGGCGGAGCGCAGCCCCCCAACGCGGTGATCGGCGGC
ATCATGGCCGCGATCCTGGCCATCACGCTGGGGCTGCAGCCGACCGTGGCCGTGGCCACCGCCATCCCGTTTTCGCTGCT
GGGGCAGTACGCGGTGACGCTGCTGTTCACCGCCATGTCGCCCGTGATGTCCTACGCCGACCGGGCGGCGCAGGAGGCCA
GCCCGGGCAAGATCGTGGCCATCAACTACTTCGCCATGGCGGTCCTGGGCCTGCTCTTCGGCGTCATCGTCACCCTCTTC
TTCGTGGGCGGCGCCGCCTTCGGCAACCGGGTGGTCAGCGCCATCCCGCAGTGGCTCATGAGCGGCCTCAGCGCCGCCGG
CGGCATGATGCGCTTCGTCGGCTTTGCGATCCTGCTCAAGGTCATGGCCTCCCGGGACATGTGGGGGTTCTACTTCATGG
GCTTCGCCCTGGCCAACATCGTGGCGGGCATCCCGCAGCTGAGCAGCTCGGCCCTGCTGCTCCTGGCCCTGATCGGCTTC
GCCCTGGCCTTCTGGGACTTCCAGCACCAGACCGCGCTGAAGGCCGCGGCCGTGAGCGCAGGAGGCGACGACGATGGCAT
ATAG

Upstream 100 bases:

>100_bases
GGGCGTCGAACTGGAGATCCAGCGGGTGCCGTCCACCCCGCCCGAGGACATCGCCAAGCTGTTCAAGTAGGGGTACCGCA
GGAGGAGGCAAGGTAGCAGG

Downstream 100 bases:

>100_bases
CATTCCCGACCAGTACCGCGACCGGACCCCGGCGCCGCCCCTGGACCGGGCGACGCTCAACCAGATGGCGTGGCGCTCGG
TCTTCCTGCAGGCTTCGTTC

Product: PTS system N-acetylgalactosamine-specific IIC component

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSFEITALQIILVFIVTFIAAIDQFNFLESLYQPIVTGAVIGAILGDVRTGLIVGGTYQLMTIGNMPIGGAQPPNAVIGG
IMAAILAITLGLQPTVAVATAIPFSLLGQYAVTLLFTAMSPVMSYADRAAQEASPGKIVAINYFAMAVLGLLFGVIVTLF
FVGGAAFGNRVVSAIPQWLMSGLSAAGGMMRFVGFAILLKVMASRDMWGFYFMGFALANIVAGIPQLSSSALLLLALIGF
ALAFWDFQHQTALKAAAVSAGGDDDGI

Sequences:

>Translated_267_residues
MSFEITALQIILVFIVTFIAAIDQFNFLESLYQPIVTGAVIGAILGDVRTGLIVGGTYQLMTIGNMPIGGAQPPNAVIGG
IMAAILAITLGLQPTVAVATAIPFSLLGQYAVTLLFTAMSPVMSYADRAAQEASPGKIVAINYFAMAVLGLLFGVIVTLF
FVGGAAFGNRVVSAIPQWLMSGLSAAGGMMRFVGFAILLKVMASRDMWGFYFMGFALANIVAGIPQLSSSALLLLALIGF
ALAFWDFQHQTALKAAAVSAGGDDDGI
>Mature_266_residues
SFEITALQIILVFIVTFIAAIDQFNFLESLYQPIVTGAVIGAILGDVRTGLIVGGTYQLMTIGNMPIGGAQPPNAVIGGI
MAAILAITLGLQPTVAVATAIPFSLLGQYAVTLLFTAMSPVMSYADRAAQEASPGKIVAINYFAMAVLGLLFGVIVTLFF
VGGAAFGNRVVSAIPQWLMSGLSAAGGMMRFVGFAILLKVMASRDMWGFYFMGFALANIVAGIPQLSSSALLLLALIGFA
LAFWDFQHQTALKAAAVSAGGDDDGI

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=268, Percent_Identity=32.8358208955224, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788121, Length=275, Percent_Identity=32.3636363636364, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 27799; Mature: 27668

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEITALQIILVFIVTFIAAIDQFNFLESLYQPIVTGAVIGAILGDVRTGLIVGGTYQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEE
MTIGNMPIGGAQPPNAVIGGIMAAILAITLGLQPTVAVATAIPFSLLGQYAVTLLFTAMS
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVMSYADRAAQEASPGKIVAINYFAMAVLGLLFGVIVTLFFVGGAAFGNRVVSAIPQWLM
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLSAAGGMMRFVGFAILLKVMASRDMWGFYFMGFALANIVAGIPQLSSSALLLLALIGF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ALAFWDFQHQTALKAAAVSAGGDDDGI
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFEITALQIILVFIVTFIAAIDQFNFLESLYQPIVTGAVIGAILGDVRTGLIVGGTYQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEE
MTIGNMPIGGAQPPNAVIGGIMAAILAITLGLQPTVAVATAIPFSLLGQYAVTLLFTAMS
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVMSYADRAAQEASPGKIVAINYFAMAVLGLLFGVIVTLFFVGGAAFGNRVVSAIPQWLM
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLSAAGGMMRFVGFAILLKVMASRDMWGFYFMGFALANIVAGIPQLSSSALLLLALIGF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ALAFWDFQHQTALKAAAVSAGGDDDGI
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]