| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is mpg1 [H]
Identifier: 51892258
GI number: 51892258
Start: 1247181
End: 1248212
Strand: Reverse
Name: mpg1 [H]
Synonym: STH1120
Alternate gene names: 51892258
Gene position: 1248212-1247181 (Counterclockwise)
Preceding gene: 51892259
Following gene: 51892257
Centisome position: 35.0
GC content: 68.7
Gene sequence:
>1032_bases ATGGCTGTTCGCGCAATCCTGTTGGCCGGAGGGCTGGGTACGCGGCTGCACCCCCTGACGGTTGAGCTGCCGAAGCCAAT GGTGCCTGTACTCGGCAAACCCTGGCTGAGTCGGCTCATCGACCAGCTGGCCGCCTTCGGGGTCACCGACATCACCCTGA GCCTCCGCCACGGCGGGCAGGTCGTCACGGACTACTTCAGGGAATCGCCCCCGGGCGTACGGCTGCGGTTCGCGGTTGAG CCCCAGCCCCTTGGAACCGGTGGTGCCATCCGGTTCGCCGCCGGACCGGACCCCACGGACACCCTACTCATCCTGAACGC GGATATTGTACAGACATTTGATCTGAATGCCCTGTTAGAGTTCCATCGCCAGCACCGTGCCCAGGTGACCATCGGGTTGG TCGAGGTGGCCGATCCGTCCGCCTACGGCGCTGTAGAACTGGATAAGAACAGTCGTGTTACGCGATTTGTGGAAAAGCCA CGCCCGGGTGAGACGGACAGCCGGATGGTCAACGCCGGTGTGTACGTGTTCGACCCGGGCGTTCTGTCTTGGATCCCGCC GGAGCGACCCGTCTCGGTGGAGCGGGAGACCTTCCCGGCCCTGCTCCGGGACGGCGTGCGAGTCTACGGCTGCCTCTGCA CCGGGTACTGGAAGGACATCGGCACCGGCGACCGCTACCTCCAACTGCACCGGGACATCCTGGAGGGGCGTTGCCCCATC CCGGTCTCCGGCCCCGTGCGCGGCCCGGCCCACTGGCAGGCGGACGACGCGGACGTCTCCCCGGACGCCCGGATCATGCC GCCGGTCTACATCGGGTCCGGCGCGGTGATCGAGGCCGGCGCGCAGGTCGGCCCCCGGGCGGTGATCGGCGCGGGCTGCC TGGTGGCCAAGGGCGCCCGCATCAGCGACTCGGTGCTGTGGGACGGGGCGCGGGTTGGCGCCGGCGCCACCGTGCGCCAC TCTGTCATCGGCTTCGCGACGGGGATCGGCGGCGGCACCGTCGAGAACGTGCTGCTGGCCGGCTGGAGGTGA
Upstream 100 bases:
>100_bases CGGGAGGTTGCTGCCCGCACCGAAATGCGGTACAATATGGAACCGTTAGCACTCACCTATGACGAGTGCTAGTAGTATCT CGGGCCGAGGAGGGATCTTC
Downstream 100 bases:
>100_bases GGGGCGGTGAGTGCGAGGCTTGCGATCGTCAGCACGTACCCGCCCCGGCAGTGCGGCCTGGCGACGTTCTCTGCGCACCT GCGCGGGGGCCTTCTGGCCG
Product: putative mannose-1-phosphate guanyltransferase
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MAVRAILLAGGLGTRLHPLTVELPKPMVPVLGKPWLSRLIDQLAAFGVTDITLSLRHGGQVVTDYFRESPPGVRLRFAVE PQPLGTGGAIRFAAGPDPTDTLLILNADIVQTFDLNALLEFHRQHRAQVTIGLVEVADPSAYGAVELDKNSRVTRFVEKP RPGETDSRMVNAGVYVFDPGVLSWIPPERPVSVERETFPALLRDGVRVYGCLCTGYWKDIGTGDRYLQLHRDILEGRCPI PVSGPVRGPAHWQADDADVSPDARIMPPVYIGSGAVIEAGAQVGPRAVIGAGCLVAKGARISDSVLWDGARVGAGATVRH SVIGFATGIGGGTVENVLLAGWR
Sequences:
>Translated_343_residues MAVRAILLAGGLGTRLHPLTVELPKPMVPVLGKPWLSRLIDQLAAFGVTDITLSLRHGGQVVTDYFRESPPGVRLRFAVE PQPLGTGGAIRFAAGPDPTDTLLILNADIVQTFDLNALLEFHRQHRAQVTIGLVEVADPSAYGAVELDKNSRVTRFVEKP RPGETDSRMVNAGVYVFDPGVLSWIPPERPVSVERETFPALLRDGVRVYGCLCTGYWKDIGTGDRYLQLHRDILEGRCPI PVSGPVRGPAHWQADDADVSPDARIMPPVYIGSGAVIEAGAQVGPRAVIGAGCLVAKGARISDSVLWDGARVGAGATVRH SVIGFATGIGGGTVENVLLAGWR >Mature_342_residues AVRAILLAGGLGTRLHPLTVELPKPMVPVLGKPWLSRLIDQLAAFGVTDITLSLRHGGQVVTDYFRESPPGVRLRFAVEP QPLGTGGAIRFAAGPDPTDTLLILNADIVQTFDLNALLEFHRQHRAQVTIGLVEVADPSAYGAVELDKNSRVTRFVEKPR PGETDSRMVNAGVYVFDPGVLSWIPPERPVSVERETFPALLRDGVRVYGCLCTGYWKDIGTGDRYLQLHRDILEGRCPIP VSGPVRGPAHWQADDADVSPDARIMPPVYIGSGAVIEAGAQVGPRAVIGAGCLVAKGARISDSVLWDGARVGAGATVRHS VIGFATGIGGGTVENVLLAGWR
Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=345, Percent_Identity=30.7246376811594, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI11761619, Length=333, Percent_Identity=30.6306306306306, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI31881779, Length=376, Percent_Identity=27.6595744680851, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI45447090, Length=376, Percent_Identity=27.6595744680851, Blast_Score=110, Evalue=2e-24, Organism=Escherichia coli, GI1788351, Length=258, Percent_Identity=28.6821705426357, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790224, Length=239, Percent_Identity=26.7782426778243, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1788355, Length=272, Percent_Identity=25.3676470588235, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI133931050, Length=344, Percent_Identity=29.9418604651163, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17509979, Length=348, Percent_Identity=27.2988505747126, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17509981, Length=333, Percent_Identity=26.7267267267267, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6320148, Length=334, Percent_Identity=31.7365269461078, Blast_Score=168, Evalue=1e-42, Organism=Drosophila melanogaster, GI21355443, Length=331, Percent_Identity=30.2114803625378, Blast_Score=157, Evalue=8e-39, Organism=Drosophila melanogaster, GI24644084, Length=331, Percent_Identity=30.2114803625378, Blast_Score=157, Evalue=8e-39, Organism=Drosophila melanogaster, GI24653912, Length=379, Percent_Identity=25.8575197889182, Blast_Score=88, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 36622; Mature: 36490
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRAILLAGGLGTRLHPLTVELPKPMVPVLGKPWLSRLIDQLAAFGVTDITLSLRHGGQ CCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCH VVTDYFRESPPGVRLRFAVEPQPLGTGGAIRFAAGPDPTDTLLILNADIVQTFDLNALLE HHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCEEEEEECCHHHHCCHHHHHH FHRQHRAQVTIGLVEVADPSAYGAVELDKNSRVTRFVEKPRPGETDSRMVNAGVYVFDPG HHHHCCCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCCCCCCEEEECCEEEECCC VLSWIPPERPVSVERETFPALLRDGVRVYGCLCTGYWKDIGTGDRYLQLHRDILEGRCPI CEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHHCCCCCC PVSGPVRGPAHWQADDADVSPDARIMPPVYIGSGAVIEAGAQVGPRAVIGAGCLVAKGAR CCCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCEEECCCCCCCCCEEECCHHEECCCC ISDSVLWDGARVGAGATVRHSVIGFATGIGGGTVENVLLAGWR CCCCEEECCCCCCCCCHHHHHHHHHEECCCCCCHHHHEEECCC >Mature Secondary Structure AVRAILLAGGLGTRLHPLTVELPKPMVPVLGKPWLSRLIDQLAAFGVTDITLSLRHGGQ CEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCH VVTDYFRESPPGVRLRFAVEPQPLGTGGAIRFAAGPDPTDTLLILNADIVQTFDLNALLE HHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCEEEEEECCHHHHCCHHHHHH FHRQHRAQVTIGLVEVADPSAYGAVELDKNSRVTRFVEKPRPGETDSRMVNAGVYVFDPG HHHHCCCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCCCCCCEEEECCEEEECCC VLSWIPPERPVSVERETFPALLRDGVRVYGCLCTGYWKDIGTGDRYLQLHRDILEGRCPI CEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHHCCCCCC PVSGPVRGPAHWQADDADVSPDARIMPPVYIGSGAVIEAGAQVGPRAVIGAGCLVAKGAR CCCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCEEECCCCCCCCCEEECCHHEECCCC ISDSVLWDGARVGAGATVRHSVIGFATGIGGGTVENVLLAGWR CCCCEEECCCCCCCCCHHHHHHHHHEECCCCCCHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]