| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892171
Identifier: 51892171
GI number: 51892171
Start: 1149670
End: 1150542
Strand: Reverse
Name: 51892171
Synonym: STH1033
Alternate gene names: NA
Gene position: 1150542-1149670 (Counterclockwise)
Preceding gene: 51892173
Following gene: 51892166
Centisome position: 32.26
GC content: 74.8
Gene sequence:
>873_bases ATGGGCCGGACGATATGGCGGACACCCCCCTGGCACATCCGCCGGACCGGCTTTCCCGAGGCCTGGCGGCTCCTTCGGCT GCGCAGGCGGCGCCGCGGCCCGGTGGAGATCGGCCTGCTGGACAGCGGCGTGGACCTGACCCACCCCTACCTGCGGGACC TGCTCGGACCGGGAATCAACCTGCTCTCTCCCGGCGACCTGCCCCACGACGATCACGGCCACGGGACCCATGTGGCCGGC ATCCTGGCGGTGGCGTCGGGAGCGGTAGGCGGGCAGCGGCCGGTCTGGCCGCCGCCCCTGCGCATCCGGCCGGTCAAGAT CTTCGACCGGCAAGGCTACGGCCGCATCCGGGACATCATCGCGGGGCTGCAGTGGTGCCGCGCGCAGGGCTGCGAGATCG TCAACCTCAGCTTCGGCACCGACCGGCGCGCCAGCGAGGAACTGGCGGAGGCCATCCGCGCGCTGGAGAAGGCCGGCATC CTGCTGGTAGGCGCGGCCGGCAACGACGGCCGGGGCGGGGCGGTGGACACGCCGGGGAAGTACCCCGAGGTGCTGGCTGT GGCGGCCATCAACCGGCGCGACCGGCTCGCCCGCTTCTCCAGCCGCGGGCCCGAGGTCGACCTGGTGGCCCCGGGCGCGG GCCTCTTCTCGCTGGCCCCGGGCGGCCGGTTCTGCCGCATGAGCGGCACCTCCATGGCCGCGCCCCACGTGACGGCCGCC GCAGCGATGCTGCTCTCGGTCCGCCCGGGCCTCACCCCCGCGGCCGTGCGGGCGCACCTGAAGCACACCGCCGAATGGCT CCCCCAGATCCACGCCTCTGCGCAGGGCGCCGGCCTGCTGCGGGCAGACCGGCTCCTGCGGGAGGAACCGTGA
Upstream 100 bases:
>100_bases GTATTATACGAGCGATACCATAAAAAGTAAAGTCCCGGAGTGGCATTGCCCTCCGACCCGCCGTAATGATGGTCCAGACT CGGCGGGAGGAGCGAAACCG
Downstream 100 bases:
>100_bases AGGGGCCGGCGGCGACCACAAAGGCTGGCGCATCATCCTGCGCCAGCCTGCACCTTATCTGTATCTCGGTTATTGCATTC CCCGCTCGACAGCGGCAGAC
Product: subtilisin-like alkaline serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MGRTIWRTPPWHIRRTGFPEAWRLLRLRRRRRGPVEIGLLDSGVDLTHPYLRDLLGPGINLLSPGDLPHDDHGHGTHVAG ILAVASGAVGGQRPVWPPPLRIRPVKIFDRQGYGRIRDIIAGLQWCRAQGCEIVNLSFGTDRRASEELAEAIRALEKAGI LLVGAAGNDGRGGAVDTPGKYPEVLAVAAINRRDRLARFSSRGPEVDLVAPGAGLFSLAPGGRFCRMSGTSMAAPHVTAA AAMLLSVRPGLTPAAVRAHLKHTAEWLPQIHASAQGAGLLRADRLLREEP
Sequences:
>Translated_290_residues MGRTIWRTPPWHIRRTGFPEAWRLLRLRRRRRGPVEIGLLDSGVDLTHPYLRDLLGPGINLLSPGDLPHDDHGHGTHVAG ILAVASGAVGGQRPVWPPPLRIRPVKIFDRQGYGRIRDIIAGLQWCRAQGCEIVNLSFGTDRRASEELAEAIRALEKAGI LLVGAAGNDGRGGAVDTPGKYPEVLAVAAINRRDRLARFSSRGPEVDLVAPGAGLFSLAPGGRFCRMSGTSMAAPHVTAA AAMLLSVRPGLTPAAVRAHLKHTAEWLPQIHASAQGAGLLRADRLLREEP >Mature_289_residues GRTIWRTPPWHIRRTGFPEAWRLLRLRRRRRGPVEIGLLDSGVDLTHPYLRDLLGPGINLLSPGDLPHDDHGHGTHVAGI LAVASGAVGGQRPVWPPPLRIRPVKIFDRQGYGRIRDIIAGLQWCRAQGCEIVNLSFGTDRRASEELAEAIRALEKAGIL LVGAAGNDGRGGAVDTPGKYPEVLAVAAINRRDRLARFSSRGPEVDLVAPGAGLFSLAPGGRFCRMSGTSMAAPHVTAAA AMLLSVRPGLTPAAVRAHLKHTAEWLPQIHASAQGAGLLRADRLLREEP
Specific function: Shows keratinolytic activity [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4506775, Length=271, Percent_Identity=27.3062730627306, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI31317307, Length=301, Percent_Identity=28.9036544850498, Blast_Score=75, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6319893, Length=256, Percent_Identity=31.25, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6324576, Length=225, Percent_Identity=29.3333333333333, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320775, Length=291, Percent_Identity=26.8041237113402, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI45550681, Length=274, Percent_Identity=28.4671532846715, Blast_Score=91, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 31256; Mature: 31124
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTIWRTPPWHIRRTGFPEAWRLLRLRRRRRGPVEIGLLDSGVDLTHPYLRDLLGPGIN CCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCC LLSPGDLPHDDHGHGTHVAGILAVASGAVGGQRPVWPPPLRIRPVKIFDRQGYGRIRDII CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHH AGLQWCRAQGCEIVNLSFGTDRRASEELAEAIRALEKAGILLVGAAGNDGRGGAVDTPGK HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC YPEVLAVAAINRRDRLARFSSRGPEVDLVAPGAGLFSLAPGGRFCRMSGTSMAAPHVTAA CHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCHHHHH AAMLLSVRPGLTPAAVRAHLKHTAEWLPQIHASAQGAGLLRADRLLREEP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure GRTIWRTPPWHIRRTGFPEAWRLLRLRRRRRGPVEIGLLDSGVDLTHPYLRDLLGPGIN CCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCC LLSPGDLPHDDHGHGTHVAGILAVASGAVGGQRPVWPPPLRIRPVKIFDRQGYGRIRDII CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHH AGLQWCRAQGCEIVNLSFGTDRRASEELAEAIRALEKAGILLVGAAGNDGRGGAVDTPGK HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC YPEVLAVAAINRRDRLARFSSRGPEVDLVAPGAGLFSLAPGGRFCRMSGTSMAAPHVTAA CHHHHHHHHHCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCEEEECCCCCCCCHHHHH AAMLLSVRPGLTPAAVRAHLKHTAEWLPQIHASAQGAGLLRADRLLREEP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369007; 11058132; 1370008 [H]