| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892104
Identifier: 51892104
GI number: 51892104
Start: 1083819
End: 1084304
Strand: Reverse
Name: 51892104
Synonym: STH966
Alternate gene names: NA
Gene position: 1084304-1083819 (Counterclockwise)
Preceding gene: 51892110
Following gene: 51892103
Centisome position: 30.41
GC content: 69.14
Gene sequence:
>486_bases ATGCTTTCCACGCCGGGGAGGACCCGCCCTGCAGGAACCGACCGTGGCCGGCCCGAACCCGAATCGGGAAGGGAGAGTGA GCACGTGCGCTTCCGTCCGGATCAGCGCCCCTCCAAGTGGGGGGCCACCGCCGCCGTGGTCGACCGGCAGCGTGCCGAGG ACGTGGTGGCCTGCCTGTCCGCGCTGCAGGGCACGCCGTTTGACGCCGTGGTCCGGCTGTCCGACCTGACCGAGATCAAG GGGTACCGTTATGTCCTGCTCCAGGTGAGCCTGGATTTCAACCACCCCCACTTCCCCCGCATCGCCGACACCCTGGACGA GCTGGGGGGCAGCGAGTTCCAGCTGATCGTCGTCGAGACGCCCGAGGGCGCGGTCTACCTCATCGTCGACAAGCACAATC TGCCCGACGAGGAGATGCGCCCGGACCATCCCCTGTTGCGCCGGCTGGCCGACTGGCTCGGAAGGGCCATGGCCTCCGGC GGGTGA
Upstream 100 bases:
>100_bases GGATGCCGGCCAGAAGATCCGGCTCGTCAGGCCCGTAGGCCAGGGCCTGCGGAGCGAAGAACAACGCCTTGATCACCTAC AGCAGAACCTCCTCTCACGT
Downstream 100 bases:
>100_bases CCCCCTGTGCCGGAGAATGCAAACTATTAAAGGAGTTATCGCGTCCACCCCTGAACTGTCTGCCCAACTCGGCTTCCGCT ATGGTATACTCCTTTGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLSTPGRTRPAGTDRGRPEPESGRESEHVRFRPDQRPSKWGATAAVVDRQRAEDVVACLSALQGTPFDAVVRLSDLTEIK GYRYVLLQVSLDFNHPHFPRIADTLDELGGSEFQLIVVETPEGAVYLIVDKHNLPDEEMRPDHPLLRRLADWLGRAMASG G
Sequences:
>Translated_161_residues MLSTPGRTRPAGTDRGRPEPESGRESEHVRFRPDQRPSKWGATAAVVDRQRAEDVVACLSALQGTPFDAVVRLSDLTEIK GYRYVLLQVSLDFNHPHFPRIADTLDELGGSEFQLIVVETPEGAVYLIVDKHNLPDEEMRPDHPLLRRLADWLGRAMASG G >Mature_161_residues MLSTPGRTRPAGTDRGRPEPESGRESEHVRFRPDQRPSKWGATAAVVDRQRAEDVVACLSALQGTPFDAVVRLSDLTEIK GYRYVLLQVSLDFNHPHFPRIADTLDELGGSEFQLIVVETPEGAVYLIVDKHNLPDEEMRPDHPLLRRLADWLGRAMASG G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17938; Mature: 17938
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTPGRTRPAGTDRGRPEPESGRESEHVRFRPDQRPSKWGATAAVVDRQRAEDVVACLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHH ALQGTPFDAVVRLSDLTEIKGYRYVLLQVSLDFNHPHFPRIADTLDELGGSEFQLIVVET HHCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEC PEGAVYLIVDKHNLPDEEMRPDHPLLRRLADWLGRAMASGG CCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSTPGRTRPAGTDRGRPEPESGRESEHVRFRPDQRPSKWGATAAVVDRQRAEDVVACLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHH ALQGTPFDAVVRLSDLTEIKGYRYVLLQVSLDFNHPHFPRIADTLDELGGSEFQLIVVET HHCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEC PEGAVYLIVDKHNLPDEEMRPDHPLLRRLADWLGRAMASGG CCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA