| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892057
Identifier: 51892057
GI number: 51892057
Start: 1039292
End: 1039717
Strand: Reverse
Name: 51892057
Synonym: STH919
Alternate gene names: NA
Gene position: 1039717-1039292 (Counterclockwise)
Preceding gene: 51892060
Following gene: 51892056
Centisome position: 29.16
GC content: 69.01
Gene sequence:
>426_bases GTGACCAAGCGCGGGTGGATCCTCGTCGCCGTCGCGGCCGCGGCCCTTGTCCTGCTCATCGGCGGGCCGTCGGTCATCAC CGCCACCGGCGCGGAGCCGGCGACCTGCGCCACGTGCCACTCCATGCAAGAGTTCCGCACAACCCACGCCCAGTCCGACC ACGCGGCGGTCGCCTGCACCCAGTGCCACCTGCCCCAGGGGCTCGCCTCGATCCCGGCCAAGTACGAGGCGGGGTTCAAG CACGTGTGGGCGACCATCACGGGCTACGAGGACATCCAACTGTCCCCGGAGAGCGAGCAGATCCTGCTGGACAACTGCAT CGCCTGCCACGTGCAGACCGACCACGTCCGCGTGCCGGAGAACCGCGGCTGCCTGAACTGCCACTTCGACGATCCACACG GCGTCAGGGAGGACCGGAAATGGTGA
Upstream 100 bases:
>100_bases TTCCTTGTCCCCGCCCAAGGGTATCCCAATCTCCGTGTAATCCCTCCGAAATCCTTTACTACTACCCTGAAGGGCAGATG AATCCACGGGAGGGATTTGT
Downstream 100 bases:
>100_bases TCAGCGGACTGGTGTTCCAGTGCGACCCCGCCCGGGTGGAGGCGGTCGCGGCGCGGCTGGCCGGCGTGCCGGGGTTGTCC GACATCACCCCGGGAGGCCG
Product: nitrate reductase component, cytochrome C-type protein
Products: NA
Alternate protein names: Cytochrome C Nitrite Reductase Small Subunit
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTKRGWILVAVAAAALVLLIGGPSVITATGAEPATCATCHSMQEFRTTHAQSDHAAVACTQCHLPQGLASIPAKYEAGFK HVWATITGYEDIQLSPESEQILLDNCIACHVQTDHVRVPENRGCLNCHFDDPHGVREDRKW
Sequences:
>Translated_141_residues MTKRGWILVAVAAAALVLLIGGPSVITATGAEPATCATCHSMQEFRTTHAQSDHAAVACTQCHLPQGLASIPAKYEAGFK HVWATITGYEDIQLSPESEQILLDNCIACHVQTDHVRVPENRGCLNCHFDDPHGVREDRKW >Mature_140_residues TKRGWILVAVAAAALVLLIGGPSVITATGAEPATCATCHSMQEFRTTHAQSDHAAVACTQCHLPQGLASIPAKYEAGFKH VWATITGYEDIQLSPESEQILLDNCIACHVQTDHVRVPENRGCLNCHFDDPHGVREDRKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15330; Mature: 15198
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRGWILVAVAAAALVLLIGGPSVITATGAEPATCATCHSMQEFRTTHAQSDHAAVACT CCCCCEEHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE QCHLPQGLASIPAKYEAGFKHVWATITGYEDIQLSPESEQILLDNCIACHVQTDHVRVPE ECCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEECCEEEEEEECCCEECCC NRGCLNCHFDDPHGVREDRKW CCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure TKRGWILVAVAAAALVLLIGGPSVITATGAEPATCATCHSMQEFRTTHAQSDHAAVACT CCCCEEHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE QCHLPQGLASIPAKYEAGFKHVWATITGYEDIQLSPESEQILLDNCIACHVQTDHVRVPE ECCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEECCEEEEEEECCCEECCC NRGCLNCHFDDPHGVREDRKW CCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA