| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51891866
Identifier: 51891866
GI number: 51891866
Start: 812104
End: 813009
Strand: Reverse
Name: 51891866
Synonym: STH728
Alternate gene names: NA
Gene position: 813009-812104 (Counterclockwise)
Preceding gene: 51891867
Following gene: 51891865
Centisome position: 22.8
GC content: 73.18
Gene sequence:
>906_bases GTGAGACAGAGGAGCGACCTTACCGTGCATACCGATCCTATCGCCATCACCTCCGAGACGCACAGCCTGGCCGGAACCCT GGTCCTGCCGGACGGTGCCGGCAACGACCGGCCGGTGCCCGCCGCCCTCATCGTCGGGGGGCCGGGCCCGCTGCCCCTGG AGCGGCGGGCCCAGGACGGTACGCCGAACTGGCCCCTGCGCTGGGCGGAGGCCTTCGGGGCGGCAGGCCTGGCCTGCCTC TGCTACGACCAGCGGGGCAGCGGCGAATCCACGGGGCAGTACGAGGACGCCGACTGGGACGACCTCTACGGCGATGCGGC AGCCGCCGCCGAGATCCTGAGGCTGCAGCCCGAAGTCAGCCGGGTCATTGCGGTGGCCTGGGCCGACGCCGTCGGATTCG CTCTCCGGCTCGCGGCCGAGGGGAAGGTGGACGGGCTGATCCTCCTGGCCGCGGGCGCGCACACCGCGGAGGAGCGGTAC AGGGAGCAGGTGCGCCGGCTTGCGGCGGGCCGGGGGCTCTCCGATCGGGTCGTCGAGCTGCGCGTGCGCCAGTGGCAGGC ACAGCTGCAGGCCGTGCGGGACCGGGTCGCGGCGGGAGAGCGCGTCGCGGAAACCGACATCGGCGGCCAGCGCATCGTCA CCAACCTGCGCCGCTTCCTGGCAGTCCACGAGTTCGACCCCATGGCGGCCGCCCGGCAGGTCGCAACCCCGGCGCTGCTC TTGCACGGCGCGGCCGACACCGTGGTTCCCCCCGCGGAGTCGGAGCTTCTGGCCGAAACTCTGGCCGGTCCGGTCGAGCG GCGCGTCTACCCCGGCGAGGGACATTTCCTCTACCGGTCTGACCAGGCGGTGGCGGATGCGGTGGGCTGGATGCAGCGCC GGGCGGCAGGAATCACGGCAGACTAG
Upstream 100 bases:
>100_bases AGGGGGTACCGGGCGGCGTCATATATGGCGTCATATATAATGAAGCAATCCGCCGGGGAGACGCCTGCCGGGACGATGTG GTACAATCGGTGACAAGTCT
Downstream 100 bases:
>100_bases ATCGAAAAGTTTCGCATCCGAAACGAGGGGGGATGCGCGTGGCGTCGGTCAGCGCCGCACGCCTGTTCTTTACGGTCGCT TTGATCGAGGTCGCGACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase S; Lipoprotein
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRQRSDLTVHTDPIAITSETHSLAGTLVLPDGAGNDRPVPAALIVGGPGPLPLERRAQDGTPNWPLRWAEAFGAAGLACL CYDQRGSGESTGQYEDADWDDLYGDAAAAAEILRLQPEVSRVIAVAWADAVGFALRLAAEGKVDGLILLAAGAHTAEERY REQVRRLAAGRGLSDRVVELRVRQWQAQLQAVRDRVAAGERVAETDIGGQRIVTNLRRFLAVHEFDPMAAARQVATPALL LHGAADTVVPPAESELLAETLAGPVERRVYPGEGHFLYRSDQAVADAVGWMQRRAAGITAD
Sequences:
>Translated_301_residues MRQRSDLTVHTDPIAITSETHSLAGTLVLPDGAGNDRPVPAALIVGGPGPLPLERRAQDGTPNWPLRWAEAFGAAGLACL CYDQRGSGESTGQYEDADWDDLYGDAAAAAEILRLQPEVSRVIAVAWADAVGFALRLAAEGKVDGLILLAAGAHTAEERY REQVRRLAAGRGLSDRVVELRVRQWQAQLQAVRDRVAAGERVAETDIGGQRIVTNLRRFLAVHEFDPMAAARQVATPALL LHGAADTVVPPAESELLAETLAGPVERRVYPGEGHFLYRSDQAVADAVGWMQRRAAGITAD >Mature_301_residues MRQRSDLTVHTDPIAITSETHSLAGTLVLPDGAGNDRPVPAALIVGGPGPLPLERRAQDGTPNWPLRWAEAFGAAGLACL CYDQRGSGESTGQYEDADWDDLYGDAAAAAEILRLQPEVSRVIAVAWADAVGFALRLAAEGKVDGLILLAAGAHTAEERY REQVRRLAAGRGLSDRVVELRVRQWQAQLQAVRDRVAAGERVAETDIGGQRIVTNLRRFLAVHEFDPMAAARQVATPALL LHGAADTVVPPAESELLAETLAGPVERRVYPGEGHFLYRSDQAVADAVGWMQRRAAGITAD
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32274; Mature: 32274
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRSDLTVHTDPIAITSETHSLAGTLVLPDGAGNDRPVPAALIVGGPGPLPLERRAQDG CCCCCCCEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHCCCCC TPNWPLRWAEAFGAAGLACLCYDQRGSGESTGQYEDADWDDLYGDAAAAAEILRLQPEVS CCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCHHHH RVIAVAWADAVGFALRLAAEGKVDGLILLAAGAHTAEERYREQVRRLAAGRGLSDRVVEL HHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHH RVRQWQAQLQAVRDRVAAGERVAETDIGGQRIVTNLRRFLAVHEFDPMAAARQVATPALL HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHE LHGAADTVVPPAESELLAETLAGPVERRVYPGEGHFLYRSDQAVADAVGWMQRRAAGITA EECCCCCCCCCCHHHHHHHHHCCHHHHCEECCCCCEEEECCHHHHHHHHHHHHHCCCCCC D C >Mature Secondary Structure MRQRSDLTVHTDPIAITSETHSLAGTLVLPDGAGNDRPVPAALIVGGPGPLPLERRAQDG CCCCCCCEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHCCCCC TPNWPLRWAEAFGAAGLACLCYDQRGSGESTGQYEDADWDDLYGDAAAAAEILRLQPEVS CCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCHHHH RVIAVAWADAVGFALRLAAEGKVDGLILLAAGAHTAEERYREQVRRLAAGRGLSDRVVEL HHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHH RVRQWQAQLQAVRDRVAAGERVAETDIGGQRIVTNLRRFLAVHEFDPMAAARQVATPALL HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHE LHGAADTVVPPAESELLAETLAGPVERRVYPGEGHFLYRSDQAVADAVGWMQRRAAGITA EECCCCCCCCCCHHHHHHHHHCCHHHHCEECCCCCEEEECCHHHHHHHHHHHHHCCCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA