Click here to switch to the map view.

The map label for this gene is oxaA [H]

Identifier: 51598696

GI number: 51598696

Start: 462610

End: 464244

Strand: Direct

Name: oxaA [H]

Synonym: BG0449

Alternate gene names: 51598696

Gene position: 462610-464244 (Clockwise)

Preceding gene: 51598695

Following gene: 51598697

Centisome position: 51.16

GC content: 27.28

Gene sequence:

>1635_bases
GTGAATCAAAGTAAAAAAATTCTAAGAACGGTTTATTTGTCTTTATTTTTAATAGGTCTTTTTATGCTTATTAATGATAT
TTTTTCTTCAATCATGTTAAGCTTTAAGTCTTCTGACAAGGAAGTGCAGTTTGATTTAAATAAAAGTTTTGATGATAATG
AAATATTTTTAAGTAAAAGCAATGGCTTTGATTTGATTAATAAGTCTCAAAATATTGTTGTAGAAACAGAAATATATTTT
GCTACTTTTTCGACATTTAGAGGAAATTTGGTTTCATTAAAGCTTAAAAATCATTTAAATTTGGAAAAAGATCCTACAGA
TTTGATTAATGTTGATTATAAAAATGAAACTTTTTTCGATGTTAGTTTAGACTATTTAGTAGAGGATTTATTTTTGTATA
AAAAAATAGATAATTTAAATCACGAATTCAAAGCTTATTTTAAAAATCATGGCAAAATTTATGAGTATGTAAAGAAGTAT
ACATTTTCGGAAAAAAATGAATACTTAATGAAATTTACAGTTATTGTAAATAGTCTTAACGATTATGACTTATTTGATAT
TGATTCTTATAAAATTGTTTTTAGTTCTGAGATTGAGAGATTGAGCGATAAAGCTAAGCTACAATATAATAATTATTTAT
CTCAAATAATTTATTATGACAATAAGCTTAAATATGGTAAGGATGGTCTAAGTATTAACAATCCCAGATGGATTGGTTCT
AGTACTAAGTATTTTGAGGTGTTGATTTCTAGAGAAAATATGGAGGTTGAGTTTAAGAAGGAAAGAGGAGTTCTTAAATC
ATTTATTGTCAATAATGTTGGAAATAAAAAAAATATTAGTGATGAGTTTTTTATTTATGCTGGACCTAAGGACAATAGAT
ATCTAGACATTTTTGACAAGAGTGGTGACAATACCTTCGGTTTATCTGATATTGCTTTTGGAATGTCAGTAGAAAAGAGT
TTGTGGTATTTAATTCAAGTTCCTATGCAAATGGTAATGCAAGTTTTTTATGACGTTATACCTAATTGGGGGCTTTCAAT
TATTTTTTTGACAATTGTTGTTAGAATACTTATCTTTCCTTTGACATTTAAGGGATTTAGAGCTACTGCTGAGCTTTCCA
AACTTCAACCTAAAATGAAAGAACTTCAAGTAAAGTTTAAGCATGATCCCAAGAAGTTGAATGAAGAGATGGGAAGACTT
TATAAAGAAGAAGGGGTTAATCCTCTTGGGGGGTGTTTTCCTGTAATTTTGCAGCTTCCTATATTTTTTGCTCTTTATTC
ACTTGTAAATAATTTATTTTTATTAAGAGGAGCTAGTTTTATTCCAGGATGGATTGACGATCTGTCTATTGGTGACAGTG
TATATAATTTTGGATATAGGCTTTATTTTGTTTCTTGGACTGATATTAGAATTTTACCTTTTATTATGATGTTTACTCAA
TTGGGATCTACAATTGTTAGTTCTAATCTTGATTTAAAAAATCTTGGAGCACAACAGAAGTTTTTATATTTTGGAATGCC
TATTATGTTTTTTTTCATACTTTACAATATGCCGTCAGGGCTTTTGATATATTGGATTACAACAAATATTTTTACTATTT
TGCAGCAATACTATATAAAGATGCATTTGTCTTAA

Upstream 100 bases:

>100_bases
GATATTATTTTTGTAGTTTCTTATAACAGGTTGAATTTGACGTATTTTAGGATTGAATCTCTTATAAAAAATTTAGTTTT
AATGGTGTGAAGGGGCATGA

Downstream 100 bases:

>100_bases
AGGGGGAATAATATGAGCTATGAATTTTACGGAAAAACCGAACAAGAAGCAATAAAGAAAGCAATGAGAGACCTTGAATT
AAAAGAAGGTGAGTTTGATG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MNQSKKILRTVYLSLFLIGLFMLINDIFSSIMLSFKSSDKEVQFDLNKSFDDNEIFLSKSNGFDLINKSQNIVVETEIYF
ATFSTFRGNLVSLKLKNHLNLEKDPTDLINVDYKNETFFDVSLDYLVEDLFLYKKIDNLNHEFKAYFKNHGKIYEYVKKY
TFSEKNEYLMKFTVIVNSLNDYDLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLSINNPRWIGS
STKYFEVLISRENMEVEFKKERGVLKSFIVNNVGNKKNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKS
LWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRL
YKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYNFGYRLYFVSWTDIRILPFIMMFTQ
LGSTIVSSNLDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIKMHLS

Sequences:

>Translated_544_residues
MNQSKKILRTVYLSLFLIGLFMLINDIFSSIMLSFKSSDKEVQFDLNKSFDDNEIFLSKSNGFDLINKSQNIVVETEIYF
ATFSTFRGNLVSLKLKNHLNLEKDPTDLINVDYKNETFFDVSLDYLVEDLFLYKKIDNLNHEFKAYFKNHGKIYEYVKKY
TFSEKNEYLMKFTVIVNSLNDYDLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLSINNPRWIGS
STKYFEVLISRENMEVEFKKERGVLKSFIVNNVGNKKNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKS
LWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRL
YKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYNFGYRLYFVSWTDIRILPFIMMFTQ
LGSTIVSSNLDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIKMHLS
>Mature_544_residues
MNQSKKILRTVYLSLFLIGLFMLINDIFSSIMLSFKSSDKEVQFDLNKSFDDNEIFLSKSNGFDLINKSQNIVVETEIYF
ATFSTFRGNLVSLKLKNHLNLEKDPTDLINVDYKNETFFDVSLDYLVEDLFLYKKIDNLNHEFKAYFKNHGKIYEYVKKY
TFSEKNEYLMKFTVIVNSLNDYDLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLSINNPRWIGS
STKYFEVLISRENMEVEFKKERGVLKSFIVNNVGNKKNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKS
LWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRL
YKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYNFGYRLYFVSWTDIRILPFIMMFTQ
LGSTIVSSNLDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIKMHLS

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=224, Percent_Identity=36.1607142857143, Blast_Score=137, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24662345, Length=269, Percent_Identity=24.907063197026, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21356443, Length=269, Percent_Identity=24.907063197026, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 63759; Mature: 63759

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSKKILRTVYLSLFLIGLFMLINDIFSSIMLSFKSSDKEVQFDLNKSFDDNEIFLSKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECC
NGFDLINKSQNIVVETEIYFATFSTFRGNLVSLKLKNHLNLEKDPTDLINVDYKNETFFD
CCCCCCCCCCCEEEEEEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEE
VSLDYLVEDLFLYKKIDNLNHEFKAYFKNHGKIYEYVKKYTFSEKNEYLMKFTVIVNSLN
EEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHEEEEEEHCCCC
DYDLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLSINNPRWIGS
CCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCC
STKYFEVLISRENMEVEFKKERGVLKSFIVNNVGNKKNISDEFFIYAGPKDNRYLDIFDK
CCCEEEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEC
SGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFP
CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLP
CCCCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYNFGYRLYFVSWTDIRILPFIMMFTQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHHHHH
LGSTIVSSNLDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK
HHHHHHHCCCCHHHCCCCHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH
MHLS
EECC
>Mature Secondary Structure
MNQSKKILRTVYLSLFLIGLFMLINDIFSSIMLSFKSSDKEVQFDLNKSFDDNEIFLSKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECC
NGFDLINKSQNIVVETEIYFATFSTFRGNLVSLKLKNHLNLEKDPTDLINVDYKNETFFD
CCCCCCCCCCCEEEEEEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEE
VSLDYLVEDLFLYKKIDNLNHEFKAYFKNHGKIYEYVKKYTFSEKNEYLMKFTVIVNSLN
EEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHEEEEEEHCCCC
DYDLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLSINNPRWIGS
CCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCC
STKYFEVLISRENMEVEFKKERGVLKSFIVNNVGNKKNISDEFFIYAGPKDNRYLDIFDK
CCCEEEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEC
SGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFP
CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LTFKGFRATAELSKLQPKMKELQVKFKHDPKKLNEEMGRLYKEEGVNPLGGCFPVILQLP
CCCCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYNFGYRLYFVSWTDIRILPFIMMFTQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHHHHH
LGSTIVSSNLDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK
HHHHHHHCCCCHHHCCCCHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH
MHLS
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA