| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is yvyE [H]
Identifier: 51598685
GI number: 51598685
Start: 450902
End: 451507
Strand: Direct
Name: yvyE [H]
Synonym: BG0438
Alternate gene names: 51598685
Gene position: 450902-451507 (Clockwise)
Preceding gene: 51598683
Following gene: 51598686
Centisome position: 49.86
GC content: 23.43
Gene sequence:
>606_bases ATGATATTCGTACCCAAAAACAATAGTAATTCTAAAATTGAAATAAAAAAATCTATCTTTGTTTCATATATTTTAAATAT TGAAAAAAAAGAAGATATAAGTAAAACTATTAAAAAATATAAAATAAAATTTAAAAATGCTACACACGTAGTTTATGGAT TTAGAATTGGGAACAAGAACTCATTTCTCAATGGAATGAGTGATAATAGAGAGCCTAATTTAACGGCCGGAAAACCCACA TTAGATGCTATAATACATAACAATTTAACTGATACCTTAATAATCACATTACGATATTTTGGAGGAACTTTACTTGGTAG GGGGGGGTTGATTAAAGCATATTACAAGTCTGCCAAAGAAGTTATTAAAAATACACCTATAATAGAAAAAGAGGAGTTAG AAACTCTAAGTTTAAATCTAAATTACAATCAATACAATTTACTATTAAAAATGAAAAATAAACTTGAAATAGAAATAATA GATTCAAACTTTTCAAACAAAATAAACACTTCAATTAAATTTAAAACAAAAAATAAGCAAAAAATATCGGAATTTTTTAT AAAAAACGGCTTAATTCAAGAAATTATCAAATTTAATAAAGAATAA
Upstream 100 bases:
>100_bases ACCATACTTTATAATAATCAATAATAAAAACAAACACTATTAATAATATACATAAACAATAAATACTGCAATATCTAAAA AAATAGTATACTTACGCTAT
Downstream 100 bases:
>100_bases TATATATGCCAAATAATCAAATATTTAAAACTACTTTAAAGTATTATTATTTTTGCCATTTATGTTTTAAAATATAAAAA CAAAACCAAATAAAAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MIFVPKNNSNSKIEIKKSIFVSYILNIEKKEDISKTIKKYKIKFKNATHVVYGFRIGNKNSFLNGMSDNREPNLTAGKPT LDAIIHNNLTDTLIITLRYFGGTLLGRGGLIKAYYKSAKEVIKNTPIIEKEELETLSLNLNYNQYNLLLKMKNKLEIEII DSNFSNKINTSIKFKTKNKQKISEFFIKNGLIQEIIKFNKE
Sequences:
>Translated_201_residues MIFVPKNNSNSKIEIKKSIFVSYILNIEKKEDISKTIKKYKIKFKNATHVVYGFRIGNKNSFLNGMSDNREPNLTAGKPT LDAIIHNNLTDTLIITLRYFGGTLLGRGGLIKAYYKSAKEVIKNTPIIEKEELETLSLNLNYNQYNLLLKMKNKLEIEII DSNFSNKINTSIKFKTKNKQKISEFFIKNGLIQEIIKFNKE >Mature_201_residues MIFVPKNNSNSKIEIKKSIFVSYILNIEKKEDISKTIKKYKIKFKNATHVVYGFRIGNKNSFLNGMSDNREPNLTAGKPT LDAIIHNNLTDTLIITLRYFGGTLLGRGGLIKAYYKSAKEVIKNTPIIEKEELETLSLNLNYNQYNLLLKMKNKLEIEII DSNFSNKINTSIKFKTKNKQKISEFFIKNGLIQEIIKFNKE
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 23188; Mature: 23188
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFVPKNNSNSKIEIKKSIFVSYILNIEKKEDISKTIKKYKIKFKNATHVVYGFRIGNKN CEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCEEEEEEEEECCCC SFLNGMSDNREPNLTAGKPTLDAIIHNNLTDTLIITLRYFGGTLLGRGGLIKAYYKSAKE CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHEEEEHHHCCEEECCCCCHHHHHHHHHH VIKNTPIIEKEELETLSLNLNYNQYNLLLKMKNKLEIEIIDSNFSNKINTSIKFKTKNKQ HHHCCCCCCCCCCEEEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCHH KISEFFIKNGLIQEIIKFNKE HHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MIFVPKNNSNSKIEIKKSIFVSYILNIEKKEDISKTIKKYKIKFKNATHVVYGFRIGNKN CEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCEEEEEEEEECCCC SFLNGMSDNREPNLTAGKPTLDAIIHNNLTDTLIITLRYFGGTLLGRGGLIKAYYKSAKE CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHEEEEHHHCCEEECCCCCHHHHHHHHHH VIKNTPIIEKEELETLSLNLNYNQYNLLLKMKNKLEIEIIDSNFSNKINTSIKFKTKNKQ HHHCCCCCCCCCCEEEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCHH KISEFFIKNGLIQEIIKFNKE HHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]