| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598610
Identifier: 51598610
GI number: 51598610
Start: 359950
End: 361071
Strand: Direct
Name: 51598610
Synonym: BG0353
Alternate gene names: NA
Gene position: 359950-361071 (Clockwise)
Preceding gene: 51598607
Following gene: 51598617
Centisome position: 39.81
GC content: 22.1
Gene sequence:
>1122_bases ATGAGAATAAAAAATTTAATACTAATAGCAATTTTGTTGATTAGTACTAGCTGTGCAAAAAATAAAAATATAATTGTACT AACTGACAACAAAACAATACCATTTTATATAAATCAATTTAACATCGAAAATAAACTAGATTTTATAATTAAGTTTAGGA ACAACATTGATCTGCAAACAGTAGAAAAAGATAATGCACAAATAATTATTTCTAAAAATATTGGCAATACAAATATTATA AACTATTTTAAATCTATAAAAATCAATTATAATACCGATTATCCTATTTTAAAAAACATTTTCAAACAATTTAACTACAA AATTATCCCATTAAGCTTTGATATTCCTATTTTAATCTATAAAAATACACACCACGTTAAAAAATACATAAACAATAAGT ATTTAAAAGAAGAATACGAAAATTTCATTAAAGACGGAAAATTCTTTATATCACCCTATATTTCTGAAAACTTATTTTAT GTGATTTCTGAAATAAATGATGTGGGGTTTTCTTTTGAAAAGAACAAATTAAATTATAATGAAAATAAAATTTTAAAAAT GCTAGAATATTTCTCATCATTTTTAAATGCAAAACAAATGGATTTGCAAAAAGATTTCTTTAATAAATACGGCTACCTTA AACTAAACAAAATATTACTTAATAAAAAATCTCTTCTAATAACAGGATTGAGTGATCTAACCTTTTACAATAGCTTAAGC GAACAAGAGAAAGCACAAATAAAATTTTCATATCTCATCAACAATAACAATGAAATTGTTATCTCAAACCCAAATTTTAT TGGCACTTTAGAAACATCTATTTTAACTAAAAAATTTATCAACTGGATTTTAGATAAAAAAACCCAAAAAAACCTAATTG GATTTAACAATCAATTCCAATCAAACATATGCTTTGGTTTTGCTAACGGTTTTACTCCTTACAAAAAATTAAATTTAAAA ATAAAACACTCAATTGATGGAATATCTCCTTTTATAATTGACGAAACCCAAATCAATAGCTATTCTTATGTATTAAGTAA AAAAACAATTGAAAAAGAAAACTTGCTAATAAATGAATGGTTTTTCTCTAGAATTAAGAATCAAAAAAAAAATAAAAATT AA
Upstream 100 bases:
>100_bases TTCCCTTGCTCTATTCTTCAATTAAACACGAAAATCAATATTAACTATAAAAATTATACATAATTTATTGTAAAATAAAA GAAAAAACTTGAATAATTTT
Downstream 100 bases:
>100_bases ATATGCTTTTCCTTGTAATTTCCAACAATGACTTTAAAAATAAGGAAAAACAATAACGAAGAAAGAATAGCTAAAGATAT GTGTACACTATTAAAAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MRIKNLILIAILLISTSCAKNKNIIVLTDNKTIPFYINQFNIENKLDFIIKFRNNIDLQTVEKDNAQIIISKNIGNTNII NYFKSIKINYNTDYPILKNIFKQFNYKIIPLSFDIPILIYKNTHHVKKYINNKYLKEEYENFIKDGKFFISPYISENLFY VISEINDVGFSFEKNKLNYNENKILKMLEYFSSFLNAKQMDLQKDFFNKYGYLKLNKILLNKKSLLITGLSDLTFYNSLS EQEKAQIKFSYLINNNNEIVISNPNFIGTLETSILTKKFINWILDKKTQKNLIGFNNQFQSNICFGFANGFTPYKKLNLK IKHSIDGISPFIIDETQINSYSYVLSKKTIEKENLLINEWFFSRIKNQKKNKN
Sequences:
>Translated_373_residues MRIKNLILIAILLISTSCAKNKNIIVLTDNKTIPFYINQFNIENKLDFIIKFRNNIDLQTVEKDNAQIIISKNIGNTNII NYFKSIKINYNTDYPILKNIFKQFNYKIIPLSFDIPILIYKNTHHVKKYINNKYLKEEYENFIKDGKFFISPYISENLFY VISEINDVGFSFEKNKLNYNENKILKMLEYFSSFLNAKQMDLQKDFFNKYGYLKLNKILLNKKSLLITGLSDLTFYNSLS EQEKAQIKFSYLINNNNEIVISNPNFIGTLETSILTKKFINWILDKKTQKNLIGFNNQFQSNICFGFANGFTPYKKLNLK IKHSIDGISPFIIDETQINSYSYVLSKKTIEKENLLINEWFFSRIKNQKKNKN >Mature_373_residues MRIKNLILIAILLISTSCAKNKNIIVLTDNKTIPFYINQFNIENKLDFIIKFRNNIDLQTVEKDNAQIIISKNIGNTNII NYFKSIKINYNTDYPILKNIFKQFNYKIIPLSFDIPILIYKNTHHVKKYINNKYLKEEYENFIKDGKFFISPYISENLFY VISEINDVGFSFEKNKLNYNENKILKMLEYFSSFLNAKQMDLQKDFFNKYGYLKLNKILLNKKSLLITGLSDLTFYNSLS EQEKAQIKFSYLINNNNEIVISNPNFIGTLETSILTKKFINWILDKKTQKNLIGFNNQFQSNICFGFANGFTPYKKLNLK IKHSIDGISPFIIDETQINSYSYVLSKKTIEKENLLINEWFFSRIKNQKKNKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44038; Mature: 44038
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKNLILIAILLISTSCAKNKNIIVLTDNKTIPFYINQFNIENKLDFIIKFRNNIDLQT CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCCCCEEE VEKDNAQIIISKNIGNTNIINYFKSIKINYNTDYPILKNIFKQFNYKIIPLSFDIPILIY EECCCCEEEEECCCCCCHHHEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCEEEEE KNTHHVKKYINNKYLKEEYENFIKDGKFFISPYISENLFYVISEINDVGFSFEKNKLNYN CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCEEEEEEHHHHCCCEEECCCCCCC ENKILKMLEYFSSFLNAKQMDLQKDFFNKYGYLKLNKILLNKKSLLITGLSDLTFYNSLS HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCHHHHHHHHCC EQEKAQIKFSYLINNNNEIVISNPNFIGTLETSILTKKFINWILDKKTQKNLIGFNNQFQ CCHHHEEEEEEEEECCCEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC SNICFGFANGFTPYKKLNLKIKHSIDGISPFIIDETQINSYSYVLSKKTIEKENLLINEW CCEEEEECCCCCCCHHEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEHHH FFSRIKNQKKNKN HHHHHHHHCCCCC >Mature Secondary Structure MRIKNLILIAILLISTSCAKNKNIIVLTDNKTIPFYINQFNIENKLDFIIKFRNNIDLQT CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCCCCEEE VEKDNAQIIISKNIGNTNIINYFKSIKINYNTDYPILKNIFKQFNYKIIPLSFDIPILIY EECCCCEEEEECCCCCCHHHEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCEEEEE KNTHHVKKYINNKYLKEEYENFIKDGKFFISPYISENLFYVISEINDVGFSFEKNKLNYN CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCEEEEEEHHHHCCCEEECCCCCCC ENKILKMLEYFSSFLNAKQMDLQKDFFNKYGYLKLNKILLNKKSLLITGLSDLTFYNSLS HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCHHHHHHHHCC EQEKAQIKFSYLINNNNEIVISNPNFIGTLETSILTKKFINWILDKKTQKNLIGFNNQFQ CCHHHEEEEEEEEECCCEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC SNICFGFANGFTPYKKLNLKIKHSIDGISPFIIDETQINSYSYVLSKKTIEKENLLINEW CCEEEEECCCCCCCHHEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEHHH FFSRIKNQKKNKN HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA