| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is leuS [H]
Identifier: 51598511
GI number: 51598511
Start: 255253
End: 257775
Strand: Direct
Name: leuS [H]
Synonym: BG0254
Alternate gene names: 51598511
Gene position: 255253-257775 (Clockwise)
Preceding gene: 51598510
Following gene: 51598512
Centisome position: 28.23
GC content: 30.84
Gene sequence:
>2523_bases ATGTCTAAATACGAATTCATAAAAATTGAAAAAAAATGGCAAGAATTTTGGGATAATAATAAAACATACAAAGTAAAAGA AGATCCAAACATTCCTAAAGAAAAAAGATTATACATCCTTGACATGTTCCCCTATCCTTCTGCAAACGGACTTCATGTTG GCCATCCAGAAGGATACACAGCTACCGACATATTTGGAAGATACAAGCTTTTAAATGGATTTCATGTACTTCATCCAATA GGATTTGATAGTTTTGGACTGCCTGCTGAAAATTATGCAATACAAACAGGAACTCATCCTCAAAAAAGTACAGAAGAAAA TATTAATAAGTTTAAAAAACAAATAAAAGCTTTGGGATTTGCCTACGATTGGGATCGAGAAATCAGAACACATGACGAGA ATTACTATAAATGGACACAATGGATTTTTTTGGAATTATATAAAAAAGGTCTGGCCTATGCAAAAGAAATGCCTGTATGG TACTGTCCTGAACTTGGAACAGTATTGGCAAATGAAGAGATTATTCAAACTCCAGATGGACCAAAATCTGAGAGAGGATT TCACAATGTCGAAAAAAAATATTTAAGACAGTGGGTTTTAAAAATCACGAAGTATGCTGAAAGATTGTTAAACGACCTTG AAGAATTAGAATGGCCTGAATCTGTAAAAGAAATGCAGCGAAATTGGATTGGAAAATCAACAGGGGTTGAAATCGACTTT GAAATTGAAGGTCACAATGATAAAATCAAAGTTTTTACAACAAGGCCAGACACAATCTTTGGTATCACATATTTAGTAAT CGCACCAGAAAGCAAGCTAATAGAGAAAATAACAAAAAATAACTTTAAAAGAAATGTCTTAAAATATGTAAAGCACGAAG AACTAAAAAGTGATCTTAAGAGAACCTCTCTTGAAAAAGATAAATCAGGCGTTTTTACAGGATCTTATGCATTTCATCCA ATAACAAATGAAAAAATTCCAATTTGGATTGGAAGCTACGTACTAGGAACTTATGGTAGTGGAGCTGTAATGGGTGTTCC AGCCCACGATGAGAGAGACTTTCAATTTGCTAAAAAGTATAAATTAAAAATTTTGCCTGTAATATCAAAATCGGGAAAAA ATGAAATATTAGAAAAAGCATTTATTGATGATGGAATTTCAATAAATTCTCCTAATGAATTTAATAATCTTAAAAATTCT GAAGTAAAAGATAAAGTAATAGAATGGCTTATTAAAAACAAAAAAGGGAAAGAAAAAGTTACCTACAAGCTTAGAGATTG GATTTTTTCAAGACAAAGATACTGGGGAGAGCCTATACCCATTTTATTTGATAAGCTTGGAAATGCAGTACCTTTAGAAA AAAATGATCTTCCCTTAAAGCTTCCAAAAACTGCAAACTATAAACCTTCTAGAACGGGAGAATCTCCTTTATCAAGGATT AAAGATTGGGTAAACCTAAAAGATACAGGCTTTACAAGAGAAACAAACACAATGCCTCAATGGGCAGGCTCTTGTTGGTA TTATTTAAGATACCTCGATCCTAAAAACCCAAAAGAATTTGCAAGTAAAAAAAAAATTGAATATTGGATGCCAGTTGACC TATACATAGGTGGAGCTGAACATACGGTATTACACCTACTTTACTCAAGGTTTTGGCACAAGGTTCTTTATGATCTAGGG TATGTAAATACCAAAGAACCTTTTAAAAAGCTAATAAATCAAGGCATAATAACCGCATTTTCTTATCAAAAAGAAAATGG GATTTTAATACCTAATGACCAAGTTATAGAAAAAAACAGTAAATTTTTTGACAAAAGGGATAATAAAGAAGTAATCCAAG TAATTGCCAAGATGTCAAAATCCTTAAAAAATGTAATAAACCCAGACGACATTATTAAAGAATTTGGAGCAGACTCAATA AGAATTTATGAAATGTTTATGGGTCCACTAACAGATTCTAAACCTTGGAACACCAAAGGTATTATTGGTGTTTTTCGATT TTTAAACAAAATTTGGAACTTAAGAGAAAAAGAACTATCAAAAGACAATCCTCCAAAAGAAATAATATCTCAACTGCATA AAGCAATAAAAAAGGTCACAGAAGATACAGAAAAACTAAGCTTCAATACAGCAATCTCAGCGATGATGATATTTGTAAAT GAGCTTATAAAGTATGAAAAAAATTATTTAAATATATTTAAACCATTCATTATTATTTTATCCCCTTATGCACCCCATTT AGCAGAAGAGTTATGGGAATATATTGGAGAAACTCCCAGTTTATTTAAAAATTCAAAATGGCCAGAATTCGATGAAAACC TTATTATTAAAGACGCAAAAGAAATTGTCTTACAAATAAATGGAAAAATGAAAGACAAAATTTTACTAAGCAAAGAGACA GATGAAGAAGAGTTAAAAGAAATAGCAATGGGAAATAGCAAAATAAAAGCAAACTTATTAAATAAAAAAATTGTAAAAAT AATTGCAATTAAAAACAAGCTTGTCAACATAGTGATAAAGTAA
Upstream 100 bases:
>100_bases TCACAGCATCAAAATTGTTAAGTAGCTTATTGAAATAAACACAAATGTGATCCAAAAGGATACTAGAGAATAAATTATAG ATTAATTTTCAAGAGGACAA
Downstream 100 bases:
>100_bases AAAAGAGGCATTATATGGACTTTGAAAGTCTAAGCATTAGATATAGGAAAATTATATTCACAATATTTATATTAATTACT ATTTTTTTAGGGTTTTTTTT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 840; Mature: 839
Protein sequence:
>840_residues MSKYEFIKIEKKWQEFWDNNKTYKVKEDPNIPKEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPI GFDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLELYKKGLAYAKEMPVW YCPELGTVLANEEIIQTPDGPKSERGFHNVEKKYLRQWVLKITKYAERLLNDLEELEWPESVKEMQRNWIGKSTGVEIDF EIEGHNDKIKVFTTRPDTIFGITYLVIAPESKLIEKITKNNFKRNVLKYVKHEELKSDLKRTSLEKDKSGVFTGSYAFHP ITNEKIPIWIGSYVLGTYGSGAVMGVPAHDERDFQFAKKYKLKILPVISKSGKNEILEKAFIDDGISINSPNEFNNLKNS EVKDKVIEWLIKNKKGKEKVTYKLRDWIFSRQRYWGEPIPILFDKLGNAVPLEKNDLPLKLPKTANYKPSRTGESPLSRI KDWVNLKDTGFTRETNTMPQWAGSCWYYLRYLDPKNPKEFASKKKIEYWMPVDLYIGGAEHTVLHLLYSRFWHKVLYDLG YVNTKEPFKKLINQGIITAFSYQKENGILIPNDQVIEKNSKFFDKRDNKEVIQVIAKMSKSLKNVINPDDIIKEFGADSI RIYEMFMGPLTDSKPWNTKGIIGVFRFLNKIWNLREKELSKDNPPKEIISQLHKAIKKVTEDTEKLSFNTAISAMMIFVN ELIKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGETPSLFKNSKWPEFDENLIIKDAKEIVLQINGKMKDKILLSKET DEEELKEIAMGNSKIKANLLNKKIVKIIAIKNKLVNIVIK
Sequences:
>Translated_840_residues MSKYEFIKIEKKWQEFWDNNKTYKVKEDPNIPKEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPI GFDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLELYKKGLAYAKEMPVW YCPELGTVLANEEIIQTPDGPKSERGFHNVEKKYLRQWVLKITKYAERLLNDLEELEWPESVKEMQRNWIGKSTGVEIDF EIEGHNDKIKVFTTRPDTIFGITYLVIAPESKLIEKITKNNFKRNVLKYVKHEELKSDLKRTSLEKDKSGVFTGSYAFHP ITNEKIPIWIGSYVLGTYGSGAVMGVPAHDERDFQFAKKYKLKILPVISKSGKNEILEKAFIDDGISINSPNEFNNLKNS EVKDKVIEWLIKNKKGKEKVTYKLRDWIFSRQRYWGEPIPILFDKLGNAVPLEKNDLPLKLPKTANYKPSRTGESPLSRI KDWVNLKDTGFTRETNTMPQWAGSCWYYLRYLDPKNPKEFASKKKIEYWMPVDLYIGGAEHTVLHLLYSRFWHKVLYDLG YVNTKEPFKKLINQGIITAFSYQKENGILIPNDQVIEKNSKFFDKRDNKEVIQVIAKMSKSLKNVINPDDIIKEFGADSI RIYEMFMGPLTDSKPWNTKGIIGVFRFLNKIWNLREKELSKDNPPKEIISQLHKAIKKVTEDTEKLSFNTAISAMMIFVN ELIKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGETPSLFKNSKWPEFDENLIIKDAKEIVLQINGKMKDKILLSKET DEEELKEIAMGNSKIKANLLNKKIVKIIAIKNKLVNIVIK >Mature_839_residues SKYEFIKIEKKWQEFWDNNKTYKVKEDPNIPKEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIG FDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHDENYYKWTQWIFLELYKKGLAYAKEMPVWY CPELGTVLANEEIIQTPDGPKSERGFHNVEKKYLRQWVLKITKYAERLLNDLEELEWPESVKEMQRNWIGKSTGVEIDFE IEGHNDKIKVFTTRPDTIFGITYLVIAPESKLIEKITKNNFKRNVLKYVKHEELKSDLKRTSLEKDKSGVFTGSYAFHPI TNEKIPIWIGSYVLGTYGSGAVMGVPAHDERDFQFAKKYKLKILPVISKSGKNEILEKAFIDDGISINSPNEFNNLKNSE VKDKVIEWLIKNKKGKEKVTYKLRDWIFSRQRYWGEPIPILFDKLGNAVPLEKNDLPLKLPKTANYKPSRTGESPLSRIK DWVNLKDTGFTRETNTMPQWAGSCWYYLRYLDPKNPKEFASKKKIEYWMPVDLYIGGAEHTVLHLLYSRFWHKVLYDLGY VNTKEPFKKLINQGIITAFSYQKENGILIPNDQVIEKNSKFFDKRDNKEVIQVIAKMSKSLKNVINPDDIIKEFGADSIR IYEMFMGPLTDSKPWNTKGIIGVFRFLNKIWNLREKELSKDNPPKEIISQLHKAIKKVTEDTEKLSFNTAISAMMIFVNE LIKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGETPSLFKNSKWPEFDENLIIKDAKEIVLQINGKMKDKILLSKETD EEELKEIAMGNSKIKANLLNKKIVKIIAIKNKLVNIVIK
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=883, Percent_Identity=31.3703284258211, Blast_Score=439, Evalue=1e-123, Organism=Escherichia coli, GI1786861, Length=873, Percent_Identity=38.717067583047, Blast_Score=594, Evalue=1e-171, Organism=Escherichia coli, GI1790708, Length=415, Percent_Identity=23.1325301204819, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71997517, Length=797, Percent_Identity=30.7402760351317, Blast_Score=298, Evalue=1e-80, Organism=Caenorhabditis elegans, GI71997510, Length=797, Percent_Identity=30.7402760351317, Blast_Score=298, Evalue=1e-80, Organism=Caenorhabditis elegans, GI212645227, Length=315, Percent_Identity=32.3809523809524, Blast_Score=146, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6323414, Length=882, Percent_Identity=35.1473922902494, Blast_Score=435, Evalue=1e-122, Organism=Drosophila melanogaster, GI21355409, Length=842, Percent_Identity=30.5225653206651, Blast_Score=353, Evalue=4e-97,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 98169; Mature: 98037
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYEFIKIEKKWQEFWDNNKTYKVKEDPNIPKEKRLYILDMFPYPSANGLHVGHPEGYT CCCCEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCC ATDIFGRYKLLNGFHVLHPIGFDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGF HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCC AYDWDREIRTHDENYYKWTQWIFLELYKKGLAYAKEMPVWYCPELGTVLANEEIIQTPDG CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCEECCCC PKSERGFHNVEKKYLRQWVLKITKYAERLLNDLEELEWPESVKEMQRNWIGKSTGVEIDF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEE EIEGHNDKIKVFTTRPDTIFGITYLVIAPESKLIEKITKNNFKRNVLKYVKHEELKSDLK EEECCCCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTSLEKDKSGVFTGSYAFHPITNEKIPIWIGSYVLGTYGSGAVMGVPAHDERDFQFAKKY HHHCCCCCCCEEECCEEECCCCCCCCEEEECCHHHHCCCCCCEEECCCCCCCCHHHHHHC KLKILPVISKSGKNEILEKAFIDDGISINSPNEFNNLKNSEVKDKVIEWLIKNKKGKEKV CEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCHHH TYKLRDWIFSRQRYWGEPIPILFDKLGNAVPLEKNDLPLKLPKTANYKPSRTGESPLSRI HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHH KDWVNLKDTGFTRETNTMPQWAGSCWYYLRYLDPKNPKEFASKKKIEYWMPVDLYIGGAE HHHCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCHHHHHHCCCCEEECCEEEEECCCH HTVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITAFSYQKENGILIPNDQVIEKNS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCEECCCCHHHHCCC KFFDKRDNKEVIQVIAKMSKSLKNVINPDDIIKEFGADSIRIYEMFMGPLTDSKPWNTKG HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCH IIGVFRFLNKIWNLREKELSKDNPPKEIISQLHKAIKKVTEDTEKLSFNTAISAMMIFVN HHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELIKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGETPSLFKNSKWPEFDENLIIKDAK HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEHHHHH EIVLQINGKMKDKILLSKETDEEELKEIAMGNSKIKANLLNKKIVKIIAIKNKLVNIVIK HHHEEECCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure SKYEFIKIEKKWQEFWDNNKTYKVKEDPNIPKEKRLYILDMFPYPSANGLHVGHPEGYT CCCEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCC ATDIFGRYKLLNGFHVLHPIGFDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGF HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCC AYDWDREIRTHDENYYKWTQWIFLELYKKGLAYAKEMPVWYCPELGTVLANEEIIQTPDG CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCEECCCC PKSERGFHNVEKKYLRQWVLKITKYAERLLNDLEELEWPESVKEMQRNWIGKSTGVEIDF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEE EIEGHNDKIKVFTTRPDTIFGITYLVIAPESKLIEKITKNNFKRNVLKYVKHEELKSDLK EEECCCCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTSLEKDKSGVFTGSYAFHPITNEKIPIWIGSYVLGTYGSGAVMGVPAHDERDFQFAKKY HHHCCCCCCCEEECCEEECCCCCCCCEEEECCHHHHCCCCCCEEECCCCCCCCHHHHHHC KLKILPVISKSGKNEILEKAFIDDGISINSPNEFNNLKNSEVKDKVIEWLIKNKKGKEKV CEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCHHH TYKLRDWIFSRQRYWGEPIPILFDKLGNAVPLEKNDLPLKLPKTANYKPSRTGESPLSRI HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHH KDWVNLKDTGFTRETNTMPQWAGSCWYYLRYLDPKNPKEFASKKKIEYWMPVDLYIGGAE HHHCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCHHHHHHCCCCEEECCEEEEECCCH HTVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITAFSYQKENGILIPNDQVIEKNS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCEECCCCHHHHCCC KFFDKRDNKEVIQVIAKMSKSLKNVINPDDIIKEFGADSIRIYEMFMGPLTDSKPWNTKG HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCH IIGVFRFLNKIWNLREKELSKDNPPKEIISQLHKAIKKVTEDTEKLSFNTAISAMMIFVN HHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELIKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGETPSLFKNSKWPEFDENLIIKDAK HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEHHHHH EIVLQINGKMKDKILLSKETDEEELKEIAMGNSKIKANLLNKKIVKIIAIKNKLVNIVIK HHHEEECCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA