| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is yggV [C]
Identifier: 51598507
GI number: 51598507
Start: 251229
End: 251834
Strand: Direct
Name: yggV [C]
Synonym: BG0249
Alternate gene names: 51598507
Gene position: 251229-251834 (Clockwise)
Preceding gene: 51598503
Following gene: 51598508
Centisome position: 27.78
GC content: 23.76
Gene sequence:
>606_bases ATGAAAACACTATTTTTTGCAACAACAAATGAAAATAAAATAAATGAGGTAAAGAATATATTAGATATGCCCAATTTAAA TTTAGTGGTACCTAAAAACTTCAACATAAAAGAAACAGGAACAACATTTAAAGAAAACTCTTTACTTAAAGCAAAAGCTC TGTTTGCAATTTTAAATAAAAATCAAAATGTTTTTGGAGAAGATTCTGGATTGTGCATTGAGGCACTAAACTTGGAGCCT GGAATTTACTCTAAAAGATATGACACTTATAAGCTATGTAAAAAATTAAGCACTAATGAAAAAAATCAACTTATTTTAGA CTTAATGAAAAATGAAAAAAACAGAAAAGCATATTTTATATGCAACATAAGTTATATATCAAAAGATAGACAAATATTAA ATTTTGAAGGAATTATTAAAGGGGAAATTGCCTTAAGTTTAAATGATGATAAAAACTATGGATTTGGTTATGATTCAATA TTTTTAACTAAAAATAATAAAAAGCTTAGCGATCTAACACTTGAAGAAAAAAATAAAATATCTCATCGGGGAATAGCATT TTCAAAATTTAAAAAATTTTTATTAAAATCTTTATTCAACAACTAA
Upstream 100 bases:
>100_bases GTACAAAAATATTGAATAAAATACACATAATTAAAGAGAATAATACTTAAAACTAATATAGCTATACAATTAAACTCACA AATACTTTATTATTATATAA
Downstream 100 bases:
>100_bases ACTTAAAAGCTTTTTATATATAAAGTTTAGACTTTATTGTAAAATAAAAAGCACAATGTTTATAAAATTTCAATGTACTA TTTCTTTCCAAACAATGAAA
Product: putative deoxyribonucleotide triphosphate pyrophosphatase
Products: NA
Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNKNQNVFGEDSGLCIEALNLEP GIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFICNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSI FLTKNNKKLSDLTLEEKNKISHRGIAFSKFKKFLLKSLFNN
Sequences:
>Translated_201_residues MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNKNQNVFGEDSGLCIEALNLEP GIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFICNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSI FLTKNNKKLSDLTLEEKNKISHRGIAFSKFKKFLLKSLFNN >Mature_201_residues MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNKNQNVFGEDSGLCIEALNLEP GIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFICNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSI FLTKNNKKLSDLTLEEKNKISHRGIAFSKFKKFLLKSLFNN
Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]
COG id: COG0127
COG function: function code F; Xanthosine triphosphate pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAM1 NTPase family [H]
Homologues:
Organism=Escherichia coli, GI1789324, Length=214, Percent_Identity=34.5794392523364, Blast_Score=100, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6322529, Length=204, Percent_Identity=28.921568627451, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002637 - InterPro: IPR020922 [H]
Pfam domain/function: PF01725 Ham1p_like [H]
EC number: =3.6.1.15 [H]
Molecular weight: Translated: 23160; Mature: 23160
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNK CCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC NQNVFGEDSGLCIEALNLEPGIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFI CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE CNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSIFLTKNNKKLSDLTLEEKNKI EEEEEECCCCEEEEECCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCH SHRGIAFSKFKKFLLKSLFNN HHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNK CCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC NQNVFGEDSGLCIEALNLEPGIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFI CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE CNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSIFLTKNNKKLSDLTLEEKNKI EEEEEECCCCEEEEECCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCH SHRGIAFSKFKKFLLKSLFNN HHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA