Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is yggV [C]

Identifier: 51598507

GI number: 51598507

Start: 251229

End: 251834

Strand: Direct

Name: yggV [C]

Synonym: BG0249

Alternate gene names: 51598507

Gene position: 251229-251834 (Clockwise)

Preceding gene: 51598503

Following gene: 51598508

Centisome position: 27.78

GC content: 23.76

Gene sequence:

>606_bases
ATGAAAACACTATTTTTTGCAACAACAAATGAAAATAAAATAAATGAGGTAAAGAATATATTAGATATGCCCAATTTAAA
TTTAGTGGTACCTAAAAACTTCAACATAAAAGAAACAGGAACAACATTTAAAGAAAACTCTTTACTTAAAGCAAAAGCTC
TGTTTGCAATTTTAAATAAAAATCAAAATGTTTTTGGAGAAGATTCTGGATTGTGCATTGAGGCACTAAACTTGGAGCCT
GGAATTTACTCTAAAAGATATGACACTTATAAGCTATGTAAAAAATTAAGCACTAATGAAAAAAATCAACTTATTTTAGA
CTTAATGAAAAATGAAAAAAACAGAAAAGCATATTTTATATGCAACATAAGTTATATATCAAAAGATAGACAAATATTAA
ATTTTGAAGGAATTATTAAAGGGGAAATTGCCTTAAGTTTAAATGATGATAAAAACTATGGATTTGGTTATGATTCAATA
TTTTTAACTAAAAATAATAAAAAGCTTAGCGATCTAACACTTGAAGAAAAAAATAAAATATCTCATCGGGGAATAGCATT
TTCAAAATTTAAAAAATTTTTATTAAAATCTTTATTCAACAACTAA

Upstream 100 bases:

>100_bases
GTACAAAAATATTGAATAAAATACACATAATTAAAGAGAATAATACTTAAAACTAATATAGCTATACAATTAAACTCACA
AATACTTTATTATTATATAA

Downstream 100 bases:

>100_bases
ACTTAAAAGCTTTTTATATATAAAGTTTAGACTTTATTGTAAAATAAAAAGCACAATGTTTATAAAATTTCAATGTACTA
TTTCTTTCCAAACAATGAAA

Product: putative deoxyribonucleotide triphosphate pyrophosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNKNQNVFGEDSGLCIEALNLEP
GIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFICNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSI
FLTKNNKKLSDLTLEEKNKISHRGIAFSKFKKFLLKSLFNN

Sequences:

>Translated_201_residues
MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNKNQNVFGEDSGLCIEALNLEP
GIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFICNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSI
FLTKNNKKLSDLTLEEKNKISHRGIAFSKFKKFLLKSLFNN
>Mature_201_residues
MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNKNQNVFGEDSGLCIEALNLEP
GIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFICNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSI
FLTKNNKKLSDLTLEEKNKISHRGIAFSKFKKFLLKSLFNN

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Escherichia coli, GI1789324, Length=214, Percent_Identity=34.5794392523364, Blast_Score=100, Evalue=6e-23,
Organism=Saccharomyces cerevisiae, GI6322529, Length=204, Percent_Identity=28.921568627451, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 23160; Mature: 23160

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNK
CCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
NQNVFGEDSGLCIEALNLEPGIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFI
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE
CNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSIFLTKNNKKLSDLTLEEKNKI
EEEEEECCCCEEEEECCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCH
SHRGIAFSKFKKFLLKSLFNN
HHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTLFFATTNENKINEVKNILDMPNLNLVVPKNFNIKETGTTFKENSLLKAKALFAILNK
CCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
NQNVFGEDSGLCIEALNLEPGIYSKRYDTYKLCKKLSTNEKNQLILDLMKNEKNRKAYFI
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE
CNISYISKDRQILNFEGIIKGEIALSLNDDKNYGFGYDSIFLTKNNKKLSDLTLEEKNKI
EEEEEECCCCEEEEECCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCH
SHRGIAFSKFKKFLLKSLFNN
HHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA