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The map label for this gene is tpn50 [H]

Identifier: 51598427

GI number: 51598427

Start: 169134

End: 170303

Strand: Direct

Name: tpn50 [H]

Synonym: BG0165

Alternate gene names: 51598427

Gene position: 169134-170303 (Clockwise)

Preceding gene: 51598422

Following gene: 51598430

Centisome position: 18.7

GC content: 26.92

Gene sequence:

>1170_bases
ATGAATATAAAAGCAGCCATGCTATTGTTGCTATTATTTTTAGTCCAAAGCTTAGCTTTGTCTTCTGAAATCTTTGAATT
CAAATACATTAAAGGTACAAAGTTTAGATTAGAAGGCAAAGATAATCAAAAAGTTTATTTCAACGGCCATTACAATTCAA
GTTCTACAACAAATATTCAAATTTCAAGTGAAATAAAAGACACAAAAGAAAAATTTGCAAACATTAAAGCTTTTTTTAGA
ATCTTAAAAAGAGAAAACATTAATGAACCTTATCTATTAAATGAAGAGTTCGAAGAAACCTTCGGTGTAAATAAACAAGG
AGAATATATAATAGGAGCAAATCAAAAAAGACCCTCTGTTAGAGGCATTCCAAGATTTCCAAAAACACCTATCAAAATAA
ATGAAAAATGGACATATCCCGCAGAAGAGTACATAGAAGCGTCAAAAATAGACAACAGCATAAAAGATTTTGTTGTAAAA
TTTAATGTTAACTACGAATATAAAGGCAAGGAAGAGAACAACGGTAAACATTACCACATAATTCTTTCGAATTATGAATC
ACAATATGATATAAAAAACATCTCTTTCTATCAAAAAGTAGAACAAAAAATTTATTTTGACAATGAAATTGGTAATACAT
ATAAATACAATGACGAATATATATTTGAAATAAAGCAGAATAACAACCAACATTTTAAAATGATTGGAAACTCCCTTGGC
AGAATAGTTTCAATTGAACTTCCAAATGATAATTTCATTGAAACTGAAGTTGAAAATTACATTCAAGAAAAAAAAATAAA
AGATATTGGCGTTGAAAAAAATAATAAAGGTATTAATTTAAGCTTCGATATTGAATTTTATCCTGACTCATTCCAAATAC
TACAAAAAGAATATAAAAAACTTGACCTTATAGCTAAACTTCTTGAAAAATTTAAAAAAAATAACATTCTAATAGAAGGA
CATACTGAACAATTTGGATTAGAAGAAGAGATGTACGAGCTCTCTGAAAAAAGAGCTCGTACAATTGGAAATTATTTGAT
AAAAATGAAAGTAAAAAACAAAGATCAAATACTATTTAAAGGATGGGGATCTCAAAAACCAAAATATCCTAAATCGTCCC
CATTAAAGGCTAAAAATAGACGAGTAGAAATTACAATATTAAATAACTAA

Upstream 100 bases:

>100_bases
TGTGTTATAAATTATAATAAATATTAGATCAGAACAAAATATCAAATAGCAATTTTAAGAAAAATTTAGAAATTAAATGC
TTTTATGATAAAATCTATTA

Downstream 100 bases:

>100_bases
CTTAAGATGTATCATCTTTTGCTCTTTTTTTCTTTTTTTGTCTGGCAACTAATACATAAAAAAGCATAAGGAATCGCTAA
AAGTCTCTCTCTAGCAATCT

Product: outer membrane protein

Products: NA

Alternate protein names: Antigen tpp57 [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MNIKAAMLLLLLFLVQSLALSSEIFEFKYIKGTKFRLEGKDNQKVYFNGHYNSSSTTNIQISSEIKDTKEKFANIKAFFR
ILKRENINEPYLLNEEFEETFGVNKQGEYIIGANQKRPSVRGIPRFPKTPIKINEKWTYPAEEYIEASKIDNSIKDFVVK
FNVNYEYKGKEENNGKHYHIILSNYESQYDIKNISFYQKVEQKIYFDNEIGNTYKYNDEYIFEIKQNNNQHFKMIGNSLG
RIVSIELPNDNFIETEVENYIQEKKIKDIGVEKNNKGINLSFDIEFYPDSFQILQKEYKKLDLIAKLLEKFKKNNILIEG
HTEQFGLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFKGWGSQKPKYPKSSPLKAKNRRVEITILNN

Sequences:

>Translated_389_residues
MNIKAAMLLLLLFLVQSLALSSEIFEFKYIKGTKFRLEGKDNQKVYFNGHYNSSSTTNIQISSEIKDTKEKFANIKAFFR
ILKRENINEPYLLNEEFEETFGVNKQGEYIIGANQKRPSVRGIPRFPKTPIKINEKWTYPAEEYIEASKIDNSIKDFVVK
FNVNYEYKGKEENNGKHYHIILSNYESQYDIKNISFYQKVEQKIYFDNEIGNTYKYNDEYIFEIKQNNNQHFKMIGNSLG
RIVSIELPNDNFIETEVENYIQEKKIKDIGVEKNNKGINLSFDIEFYPDSFQILQKEYKKLDLIAKLLEKFKKNNILIEG
HTEQFGLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFKGWGSQKPKYPKSSPLKAKNRRVEITILNN
>Mature_389_residues
MNIKAAMLLLLLFLVQSLALSSEIFEFKYIKGTKFRLEGKDNQKVYFNGHYNSSSTTNIQISSEIKDTKEKFANIKAFFR
ILKRENINEPYLLNEEFEETFGVNKQGEYIIGANQKRPSVRGIPRFPKTPIKINEKWTYPAEEYIEASKIDNSIKDFVVK
FNVNYEYKGKEENNGKHYHIILSNYESQYDIKNISFYQKVEQKIYFDNEIGNTYKYNDEYIFEIKQNNNQHFKMIGNSLG
RIVSIELPNDNFIETEVENYIQEKKIKDIGVEKNNKGINLSFDIEFYPDSFQILQKEYKKLDLIAKLLEKFKKNNILIEG
HTEQFGLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFKGWGSQKPKYPKSSPLKAKNRRVEITILNN

Specific function: Could function as a porin [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 45949; Mature: 45949

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKAAMLLLLLFLVQSLALSSEIFEFKYIKGTKFRLEGKDNQKVYFNGHYNSSSTTNIQ
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCEEEEEEEECCCCCEEEE
ISSEIKDTKEKFANIKAFFRILKRENINEPYLLNEEFEETFGVNKQGEYIIGANQKRPSV
EECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCCEEEECCCCCCCC
RGIPRFPKTPIKINEKWTYPAEEYIEASKIDNSIKDFVVKFNVNYEYKGKEENNGKHYHI
CCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEECEEECCCCCCCCCEEEE
ILSNYESQYDIKNISFYQKVEQKIYFDNEIGNTYKYNDEYIFEIKQNNNQHFKMIGNSLG
EEECCCCCCCCCCHHHHHHHHHHEEEECCCCCCEEECCEEEEEEECCCCCEEEHHHCCCC
RIVSIELPNDNFIETEVENYIQEKKIKDIGVEKNNKGINLSFDIEFYPDSFQILQKEYKK
CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHH
LDLIAKLLEKFKKNNILIEGHTEQFGLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFK
HHHHHHHHHHHHHCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEE
GWGSQKPKYPKSSPLKAKNRRVEITILNN
CCCCCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MNIKAAMLLLLLFLVQSLALSSEIFEFKYIKGTKFRLEGKDNQKVYFNGHYNSSSTTNIQ
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCEEEEEEEECCCCCEEEE
ISSEIKDTKEKFANIKAFFRILKRENINEPYLLNEEFEETFGVNKQGEYIIGANQKRPSV
EECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCCEEEECCCCCCCC
RGIPRFPKTPIKINEKWTYPAEEYIEASKIDNSIKDFVVKFNVNYEYKGKEENNGKHYHI
CCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEECEEECCCCCCCCCEEEE
ILSNYESQYDIKNISFYQKVEQKIYFDNEIGNTYKYNDEYIFEIKQNNNQHFKMIGNSLG
EEECCCCCCCCCCHHHHHHHHHHEEEECCCCCCEEECCEEEEEEECCCCCEEEHHHCCCC
RIVSIELPNDNFIETEVENYIQEKKIKDIGVEKNNKGINLSFDIEFYPDSFQILQKEYKK
CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHH
LDLIAKLLEKFKKNNILIEGHTEQFGLEEEMYELSEKRARTIGNYLIKMKVKNKDQILFK
HHHHHHHHHHHHHCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEE
GWGSQKPKYPKSSPLKAKNRRVEITILNN
CCCCCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8112835; 7623668; 9665876 [H]