| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598418
Identifier: 51598418
GI number: 51598418
Start: 158208
End: 158945
Strand: Direct
Name: 51598418
Synonym: BG0156
Alternate gene names: NA
Gene position: 158208-158945 (Clockwise)
Preceding gene: 51598417
Following gene: 51598419
Centisome position: 17.5
GC content: 28.18
Gene sequence:
>738_bases ATGACATTTAGAATAAATAAACGTTTAAAATTAATGGCAGTGCTTATGTTAATGCTGAGTTGCGCTTTTTTTAAAAAGCC ACAACCTGTACAACAAGACGGCGAGATTGGAAAACAAATAAGCGATGAAAAATTGCCCTTAAACGATGGAAAATTACATT TACTATCAGGCAAAATTTTGAATAAAAAATTGCCAGTAGTAAATGAAAATCATGACGTAACTTGGATAAAAACAAAGGCA ATGACAATCTTAGATGAATATGGACAAGCAATGCCAGAATTTAAAAACAAATTTGGATATTCTTATATACTATCTCCTAT AAAAATGAATGATGAATATAGTAGTTTCACATCACTATTAATACTTTTTGAAACAACTGAAAATGGAGATAAAGAATATG AAATTGAGGATATTAAACTTATAACAGCTGGTTCCAACCTAGAACTTAAAAATCCTCTTCTAGTTGTTGAAAATTCACAA GAAGAAGGATATGTTACTGCATACCCATTTGGAATCTTGATGGACGAAGAACTTAGAAAAGCTTTTCAATTAACATATCA AAATGGTCATTGGAATTATATGCTTGCAAATTTAACCGTTAAAAACAAGATTACTCAAAAGACTGAAATTTATAAAATTT CTCTTAATTCAAAATTAATTATTGACTTTGTAAAAGAAGTATTAAAAGAAAATCCCATCTTAAAAGAGACAAATGGAGAT CTATTTGAAGATATATAA
Upstream 100 bases:
>100_bases TTGACTTTGACATAAGTATTCTATATTATTATTACAATTTAATATGGTTTTAATTACCGCTCAATAAAAACCATAAAATG GTATAAAGGAAGAAGATATA
Downstream 100 bases:
>100_bases ATATAAACGAAAGGAAATATTTTATGATCATTAAAAAATTTATTTTAACTGTAATAATTCTTTCTCTAGCTAAAAATATT TTTTCTCAAAACGAAATTAA
Product: antigen, S2, putative
Products: NA
Alternate protein names: P23-Like Cell Envelope Protein; Lipoprotein; S2 Lipoprotein
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTFRINKRLKLMAVLMLMLSCAFFKKPQPVQQDGEIGKQISDEKLPLNDGKLHLLSGKILNKKLPVVNENHDVTWIKTKA MTILDEYGQAMPEFKNKFGYSYILSPIKMNDEYSSFTSLLILFETTENGDKEYEIEDIKLITAGSNLELKNPLLVVENSQ EEGYVTAYPFGILMDEELRKAFQLTYQNGHWNYMLANLTVKNKITQKTEIYKISLNSKLIIDFVKEVLKENPILKETNGD LFEDI
Sequences:
>Translated_245_residues MTFRINKRLKLMAVLMLMLSCAFFKKPQPVQQDGEIGKQISDEKLPLNDGKLHLLSGKILNKKLPVVNENHDVTWIKTKA MTILDEYGQAMPEFKNKFGYSYILSPIKMNDEYSSFTSLLILFETTENGDKEYEIEDIKLITAGSNLELKNPLLVVENSQ EEGYVTAYPFGILMDEELRKAFQLTYQNGHWNYMLANLTVKNKITQKTEIYKISLNSKLIIDFVKEVLKENPILKETNGD LFEDI >Mature_244_residues TFRINKRLKLMAVLMLMLSCAFFKKPQPVQQDGEIGKQISDEKLPLNDGKLHLLSGKILNKKLPVVNENHDVTWIKTKAM TILDEYGQAMPEFKNKFGYSYILSPIKMNDEYSSFTSLLILFETTENGDKEYEIEDIKLITAGSNLELKNPLLVVENSQE EGYVTAYPFGILMDEELRKAFQLTYQNGHWNYMLANLTVKNKITQKTEIYKISLNSKLIIDFVKEVLKENPILKETNGDL FEDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28257; Mature: 28126
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRINKRLKLMAVLMLMLSCAFFKKPQPVQQDGEIGKQISDEKLPLNDGKLHLLSGKIL CEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCC NKKLPVVNENHDVTWIKTKAMTILDEYGQAMPEFKNKFGYSYILSPIKMNDEYSSFTSLL CCCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCCHHHHEEEE ILFETTENGDKEYEIEDIKLITAGSNLELKNPLLVVENSQEEGYVTAYPFGILMDEELRK EEEEECCCCCCEEEEEEEEEEEECCCCEECCCEEEEECCCCCCEEEEECEEEEECHHHHH AFQLTYQNGHWNYMLANLTVKNKITQKTEIYKISLNSKLIIDFVKEVLKENPILKETNGD HHHEEEECCCEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEECCCCC LFEDI HHHCC >Mature Secondary Structure TFRINKRLKLMAVLMLMLSCAFFKKPQPVQQDGEIGKQISDEKLPLNDGKLHLLSGKIL EEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCC NKKLPVVNENHDVTWIKTKAMTILDEYGQAMPEFKNKFGYSYILSPIKMNDEYSSFTSLL CCCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCCHHHHEEEE ILFETTENGDKEYEIEDIKLITAGSNLELKNPLLVVENSQEEGYVTAYPFGILMDEELRK EEEEECCCCCCEEEEEEEEEEEECCCCEECCCEEEEECCCCCCEEEEECEEEEECHHHHH AFQLTYQNGHWNYMLANLTVKNKITQKTEIYKISLNSKLIIDFVKEVLKENPILKETNGD HHHEEEECCCEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEECCCCC LFEDI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA