| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598346
Identifier: 51598346
GI number: 51598346
Start: 80811
End: 81239
Strand: Direct
Name: 51598346
Synonym: BG0084
Alternate gene names: NA
Gene position: 80811-81239 (Clockwise)
Preceding gene: 51598344
Following gene: 51598348
Centisome position: 8.94
GC content: 25.17
Gene sequence:
>429_bases ATGCTCACTGAAGAAATTAAAAAAAAATTAATAAAGCTTAGCAAAGTAAATAATTACATAATACATAAAATAAAAACAAA CCAAAATTTAAAACATCAATCTAAATGTGGAGATCAAATTTTATTCCAAATAATAGAAGCAAATAACGGAAAATTTAATT TAAAACATTATGCATCTGGATGTATGATCTTACTTGCAAGTGCCAACGCTTTAAACAAATTGTGCAATAATAAACCAAAA TCCGAAATCCTAAGCTTAGTACAAAAAGTGATAAACGGTGATTTTGCAAATCTAGAAGAAATTGACACAAGTTTAAAAAT TTTTAACATATTTACAAATACAAATAGAAAAGACTGTTTCTTACTGCCATACAAATCATTAAAAGATAGTTTGGTAAACT ATAAGCCTTTAAGGAGAACTATTAGATAA
Upstream 100 bases:
>100_bases TAAAAACAATTTAAGCTATGTTTTAAAAAATTTTTATTTAAAAATCTTCATATTATTTTTTATTATTGATTTAATAAATT AAAGAAAATAAAATAAAATT
Downstream 100 bases:
>100_bases AAATCCATTCACACTCATCAATCGGATATGAAGGAGAGCTAATTGAGATTGAAATAGACATTAAAAAAGGAATTCCTGGA ATTGATATTGTAGGACTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASGCMILLASANALNKLCNNKPK SEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCFLLPYKSLKDSLVNYKPLRRTIR
Sequences:
>Translated_142_residues MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASGCMILLASANALNKLCNNKPK SEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCFLLPYKSLKDSLVNYKPLRRTIR >Mature_142_residues MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASGCMILLASANALNKLCNNKPK SEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCFLLPYKSLKDSLVNYKPLRRTIR
Specific function: Unknown
COG id: COG0822
COG function: function code C; NifU homolog involved in Fe-S cluster formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16339; Mature: 16339
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASG CCHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHCC CMILLASANALNKLCNNKPKSEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCF HHEEEECCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCCCEE LLPYKSLKDSLVNYKPLRRTIR EECHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASG CCHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHCC CMILLASANALNKLCNNKPKSEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCF HHEEEECCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCCCEE LLPYKSLKDSLVNYKPLRRTIR EECHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]