Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is 51598346

Identifier: 51598346

GI number: 51598346

Start: 80811

End: 81239

Strand: Direct

Name: 51598346

Synonym: BG0084

Alternate gene names: NA

Gene position: 80811-81239 (Clockwise)

Preceding gene: 51598344

Following gene: 51598348

Centisome position: 8.94

GC content: 25.17

Gene sequence:

>429_bases
ATGCTCACTGAAGAAATTAAAAAAAAATTAATAAAGCTTAGCAAAGTAAATAATTACATAATACATAAAATAAAAACAAA
CCAAAATTTAAAACATCAATCTAAATGTGGAGATCAAATTTTATTCCAAATAATAGAAGCAAATAACGGAAAATTTAATT
TAAAACATTATGCATCTGGATGTATGATCTTACTTGCAAGTGCCAACGCTTTAAACAAATTGTGCAATAATAAACCAAAA
TCCGAAATCCTAAGCTTAGTACAAAAAGTGATAAACGGTGATTTTGCAAATCTAGAAGAAATTGACACAAGTTTAAAAAT
TTTTAACATATTTACAAATACAAATAGAAAAGACTGTTTCTTACTGCCATACAAATCATTAAAAGATAGTTTGGTAAACT
ATAAGCCTTTAAGGAGAACTATTAGATAA

Upstream 100 bases:

>100_bases
TAAAAACAATTTAAGCTATGTTTTAAAAAATTTTTATTTAAAAATCTTCATATTATTTTTTATTATTGATTTAATAAATT
AAAGAAAATAAAATAAAATT

Downstream 100 bases:

>100_bases
AAATCCATTCACACTCATCAATCGGATATGAAGGAGAGCTAATTGAGATTGAAATAGACATTAAAAAAGGAATTCCTGGA
ATTGATATTGTAGGACTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASGCMILLASANALNKLCNNKPK
SEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCFLLPYKSLKDSLVNYKPLRRTIR

Sequences:

>Translated_142_residues
MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASGCMILLASANALNKLCNNKPK
SEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCFLLPYKSLKDSLVNYKPLRRTIR
>Mature_142_residues
MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASGCMILLASANALNKLCNNKPK
SEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCFLLPYKSLKDSLVNYKPLRRTIR

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16339; Mature: 16339

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASG
CCHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHCC
CMILLASANALNKLCNNKPKSEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCF
HHEEEECCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCCCEE
LLPYKSLKDSLVNYKPLRRTIR
EECHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MLTEEIKKKLIKLSKVNNYIIHKIKTNQNLKHQSKCGDQILFQIIEANNGKFNLKHYASG
CCHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHCC
CMILLASANALNKLCNNKPKSEILSLVQKVINGDFANLEEIDTSLKIFNIFTNTNRKDCF
HHEEEECCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEECCCCCCEE
LLPYKSLKDSLVNYKPLRRTIR
EECHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]