Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

Click here to switch to the map view.

The map label for this gene is 51598170

Identifier: 51598170

GI number: 51598170

Start: 4635877

End: 4636101

Strand: Reverse

Name: 51598170

Synonym: YPTB3885

Alternate gene names: NA

Gene position: 4636101-4635877 (Counterclockwise)

Preceding gene: 51598171

Following gene: 51598168

Centisome position: 97.71

GC content: 46.22

Gene sequence:

>225_bases
ATGCCAGCTTATCAAATTTCTTACGATCTGCGGAAGCAGAAAGATTATGCCTCACTCATTGAGCGTATCAAGTCCTATGG
GACCTGGTGCCATCCTCTCGAATCAACCTGGATTATCATCACCGATCAAACGGCAACTCAAGTTCGCGATTATCTCAAAG
CCGTTATGGATAACGATGATGGTTTACTCGTCACTGGTTTACGGAGAGACGGTGCGTGGTACTGA

Upstream 100 bases:

>100_bases
ACTCTGTACGATAACTACAGAGATTAGTGATGAAGGTGCGACAGGTTGCAGCCTGTCGCGTTGACTCAAACCCAAACGTC
TAAATTAGGAGATCAAATCT

Downstream 100 bases:

>100_bases
GAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGT
CTTCCCTTGTTATTGTGTAG

Product: (AJ250469) SinR-like protein [Clostri...

Products: NA

Alternate protein names: SinR-Like Protein

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MPAYQISYDLRKQKDYASLIERIKSYGTWCHPLESTWIIITDQTATQVRDYLKAVMDNDDGLLVTGLRRDGAWY

Sequences:

>Translated_74_residues
MPAYQISYDLRKQKDYASLIERIKSYGTWCHPLESTWIIITDQTATQVRDYLKAVMDNDDGLLVTGLRRDGAWY
>Mature_73_residues
PAYQISYDLRKQKDYASLIERIKSYGTWCHPLESTWIIITDQTATQVRDYLKAVMDNDDGLLVTGLRRDGAWY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8659; Mature: 8528

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAYQISYDLRKQKDYASLIERIKSYGTWCHPLESTWIIITDQTATQVRDYLKAVMDNDD
CCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCC
GLLVTGLRRDGAWY
CEEEEEECCCCCCC
>Mature Secondary Structure 
PAYQISYDLRKQKDYASLIERIKSYGTWCHPLESTWIIITDQTATQVRDYLKAVMDNDD
CCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCC
GLLVTGLRRDGAWY
CEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA