| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yhjG [H]
Identifier: 51598117
GI number: 51598117
Start: 4567110
End: 4569323
Strand: Reverse
Name: yhjG [H]
Synonym: YPTB3827
Alternate gene names: 51598117
Gene position: 4569323-4567110 (Counterclockwise)
Preceding gene: 51598118
Following gene: 51598114
Centisome position: 96.3
GC content: 52.8
Gene sequence:
>2214_bases ATGACAAGAACCGGAAAAGTATTGGTGGGCGTCAGTGGGTTTATCCTGTTGTCATTGGTGGCGGCGGTGATATTTGTCGC CTCTTTTGACTGGAATCGCTTGAAGCCAACAATTAACCAAAAAGTCTCCGCCGAGTTGCAACGGCCTTTTGCCATTCGTG GCAATTTGAGTGTGGATTGGTCACGAGAAGGCGAAGGTCCTGGCTGGCGCGGTTGGATCCCCTGGCCGCATATCCATGCG GAAGATTTGGTCTTGGGTAACCCAACGACGTTAATCAGCACACAAGAGAGCCGTGACGCTCAATCAACACAAGGCACGCC GCTCTCCGACGCGTTTCCCACCGGAGAGATGGTGACGCTTAAGCGAATCGACGCCAGCCTTGCTCCGCTGTCATTATTGA ACAAAGAAGTTCGTATCCCCCGCCTTTGGCTGACGCAGCCAGACATTCATTTGCAACGCCTGGCGAATGGCAATAACAAC TGGACGTTTAATCTGACCAATACCTCCACGGATAGCTCGTCTTGGTCAGTGGATATCGGCGATATTATTTTTGATCGCGG TGAGATAACGCTGAAAGATGCCATCCTGCAAGCTGATTTACTCGCGGTGATTGATCCGCTGGCTAAAGCGTTGCCGTTCG CACAAGTGACCGGTGTCCGTCGCGGGGCCAGTATTAATTCGGTGACCAGCAGACATTCGGCAAACACGACGACATCATCG GTCACGACGACATCAGTGGTCACGACTACAGCAACGGCCACGACTAACCCTGTGACAGAGATAGAGACGGTAAAAAGCAC GACTCCAGATTACCTCTTCGGCTGGAAAGTAGAAGGTCAGTATCAGGGGCAGCCCTTAGTGGGCAGTGGGAAAATAGGGG GCATGATATCGATGAATGACGCGAATGTGCCGTTCCCTCTGCAAGCGGATATGCGCTACGGTTCTACTCAGGTGGCCGTC GTCGGGACCTTAACCGATCCCGGAAATCTGGCGGGGCTGGATCTGCAATTGGTCTTATCCGGGACCAGTCTGGATAACCT CTATCCATTGCTCGATGTCGTACTGCCCGCCACCCCGCCTTATCAGACCGAGGGTCATCTGAGTGCTCGCCTAAAACAAG CAGGGGGCGCGGTTTATCATTATGAAAATTTTAATGGGAAGATTGGTGACAGTGATATTCACGGTGACCTGACGTATACC GACAGCCAGCCCCGGCCGAAATTAGCCGGTCAGGTCGATTCGGAAAAATTACGTTTTACCGATTTGGCTCCGCTGATCGG GGCCGATTCCAATCAGGAAAAAGCCCTACGAGGTGAACGGAATCGGCAGCCGGGCAATAAGATCCTGCCGACAGAAACGT TTGATACCAAAAGTTGGGGAGTGATGGACGCGGATGTCACTTATACGGCTAAGCGTATTGAACGGGATAAGTCATTACCG CTAAGTGATCTGTACACCCATGTCGTCTTAAAAGAGGGAACGTTACTGCTCGACCCGCTGCGGTTTGGGATGGCGGAAGG GGATCTGGCTGCAACTTTGCGCCTCGATAGTCACCAAACCCCGATGCATGGCAAGGTTGATTTGCATGTCCGGCGCATAC AATTAAAAGCCTTGCTGCCACAGGTACAGGCGATGCGGAGCAGCTTGGGGCGCTTGAGTGGTGATGCCTCCTTTACCGCA GCAGGCAACTCGGTTGCTGGCCTGTTAGCAACCAGCAACGGTAATGTGCGCCTGCTACTGAGCCAGGGGCAGATCAGCCG TAGCCTGATGGAGTTACTCGGCCTGAATGTGGGTAACTATCTGGTGGCGAAGCTGTTTGGTGATGATACGGTGAAAATTA ACTGTGCGGCGGCAGATATTACGTTGCGTAATGGGGTGGCGACGCCGAACGTGTTTGTCTTCGATACTGAAAATGCCATT ATCAATATTACCGGTAATGCTAATTTTGCTACCGAGCGGCTGAATTTATCCATCGATCCTGAAAGCAAAGGGCTGCGTAT TCTGACCCTGCGCTCGCCACTGTATGTCAAAGGGACCTTTAAACGCCCCGATGTGGGGGTGAAAACCGGAGCGTTGATTG CCCGAGGTGCCGTTGCGGCAGCACTGGGGGTGGCATTAACGCCGGCAGCGGCATTACTGGCACTGATCTCCCCCAGTGAA GGTGAAGAGAATCAGTGCGCACCGTTACTGCGAAAAATGCAGCAAAAGAAATAA
Upstream 100 bases:
>100_bases CTGTTTGAACAGGTCTTAATCGAGGATAGAGACCCAACACGCTACCCTTAGAGAGAATACGTAGATTCACAGCGACTGTA CGTAGAAGCATGGAGCTATT
Downstream 100 bases:
>100_bases TGTGTTATTGCACCGGGGGGTGAGGTAGCACCTGACAGGTGTGATCTTGCAGCTCCTCTGCTGAGGCGCGATCCTGCGTC ATCAGGTTCGCTTTGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 737; Mature: 736
Protein sequence:
>737_residues MTRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHA EDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEMVTLKRIDASLAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNN WTFNLTNTSTDSSSWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSRHSANTTTSS VTTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVPFPLQADMRYGSTQVAV VGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYT DSQPRPKLAGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKSLP LSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLPQVQAMRSSLGRLSGDASFTA AGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENAI INITGNANFATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPSE GEENQCAPLLRKMQQKK
Sequences:
>Translated_737_residues MTRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHA EDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEMVTLKRIDASLAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNN WTFNLTNTSTDSSSWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSRHSANTTTSS VTTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVPFPLQADMRYGSTQVAV VGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYT DSQPRPKLAGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKSLP LSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLPQVQAMRSSLGRLSGDASFTA AGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENAI INITGNANFATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPSE GEENQCAPLLRKMQQKK >Mature_736_residues TRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHAE DLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEMVTLKRIDASLAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNW TFNLTNTSTDSSSWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSRHSANTTTSSV TTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMNDANVPFPLQADMRYGSTQVAVV GTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTD SQPRPKLAGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKSLPL SDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLPQVQAMRSSLGRLSGDASFTAA GNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENAII NITGNANFATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPSEG EENQCAPLLRKMQQKK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=747, Percent_Identity=50.0669344042838, Blast_Score=742, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 79347; Mature: 79216
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDW CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEE SREGEGPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEMVTL CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE KRIDASLAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIG EECCCCCCCHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEHH DIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSRHSANTTTSS HEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCCCCCCC VTTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMND EEEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCEEEECC ANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPP CCCCCCEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCC YQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKLAGQVDSEKLRFT CCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEE DLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKSLP ECCHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCC LSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLP HHHHHHEEEEECCCEEECHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEHHHHHH QVQAMRSSLGRLSGDASFTAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNY HHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCE LVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENAIINITGNANFATERLNLSIDP EEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEECC ESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPSE CCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEENQCAPLLRKMQQKK CCCCHHHHHHHHHHHCC >Mature Secondary Structure TRTGKVLVGVSGFILLSLVAAVIFVASFDWNRLKPTINQKVSAELQRPFAIRGNLSVDW CCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEE SREGEGPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSTQGTPLSDAFPTGEMVTL CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE KRIDASLAPLSLLNKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSSSWSVDIG EECCCCCCCHHHHCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEHH DIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSRHSANTTTSS HEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCCCCCCC VTTTSVVTTTATATTNPVTEIETVKSTTPDYLFGWKVEGQYQGQPLVGSGKIGGMISMND EEEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCEEEECC ANVPFPLQADMRYGSTQVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPP CCCCCCEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCC YQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKLAGQVDSEKLRFT CCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEE DLAPLIGADSNQEKALRGERNRQPGNKILPTETFDTKSWGVMDADVTYTAKRIERDKSLP ECCHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCC LSDLYTHVVLKEGTLLLDPLRFGMAEGDLAATLRLDSHQTPMHGKVDLHVRRIQLKALLP HHHHHHEEEEECCCEEECHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEHHHHHH QVQAMRSSLGRLSGDASFTAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNY HHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCE LVAKLFGDDTVKINCAAADITLRNGVATPNVFVFDTENAIINITGNANFATERLNLSIDP EEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEECC ESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPSE CCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEENQCAPLLRKMQQKK CCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]