Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

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The map label for this gene is 51598094

Identifier: 51598094

GI number: 51598094

Start: 4535116

End: 4535799

Strand: Reverse

Name: 51598094

Synonym: YPTB3804

Alternate gene names: NA

Gene position: 4535799-4535116 (Counterclockwise)

Preceding gene: 51598095

Following gene: 51598093

Centisome position: 95.6

GC content: 50.88

Gene sequence:

>684_bases
ATGAAACGCTCCGAGGTCAACCAAATCCTTAAGCAGACCGGTCATTTCTTTGCCCGACACCATATCCAGCTACCGCCATT
TGCCCGTTTCACGCCACAAAGATGGCAACAGCTTGACCCTAAAGCCTGGCAAGAACTGTTTGACCTGAAACTCGGCTGGG
ATATTACCGCATTCGGCGGGAACCATTTTTTTACTCAGGGATTAACGCTGTTCACCTTACGCAACGGTTCGGTAAGCGGC
ACTCCTTACCCTAAATGCTACGCCGAAAAAATCATGCACGTCCGCGAAGGCCAGGTGACACCTATGCATTTTCACTGGCG
TAAACAGGAAGATATCATCAACCGTGGCGGCGGCAATCTTATCGTCGAGCTATGGAATTCCGACGCGTTTGAACAAACGG
AGAAGAGCGATGTCACCGTGACACTCGACGGCTGCCGCCAAACCCATGCGGCAGGCAGCCAGTTACGCTTATCTCCCGGT
GAAAGTATTTGCCTGGTGCCTGGGGTGTACCACAGTTTCTGGGGCGAGGTAGGTTACGGTGAGGTGCTGGTCGGTGAGGT
ATCGATGGTAAATGACGATGACCACGACAACCGATTTATGAAACCTCTTGAACGTTTTAATTCGATTATTGAAGACGAAC
CGGCTGAATTTGTGCTGTGTAATGAGTACTGCCGTTTCGTCTGA

Upstream 100 bases:

>100_bases
CTTACAAAGGCTGGACGATGAAATAACAGCTCGCCTCACTTCGGCTCGGTCTAATCCTCTCTCCCTATTAAGGAGAGGGG
CAACTTTTTGAGGAGATTTT

Downstream 100 bases:

>100_bases
ATTTGCCAACACCAGGAGAACGACTATGGCTTTGATTTCCCTTGCAAATGGCCTGGCTCATGCCAGGAAAAACGGTTACG
CATTGGGTGCCTTTAACGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGGNHFFTQGLTLFTLRNGSVSG
TPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNLIVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPG
ESICLVPGVYHSFWGEVGYGEVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAEFVLCNEYCRFV

Sequences:

>Translated_227_residues
MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGGNHFFTQGLTLFTLRNGSVSG
TPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNLIVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPG
ESICLVPGVYHSFWGEVGYGEVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAEFVLCNEYCRFV
>Mature_227_residues
MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGGNHFFTQGLTLFTLRNGSVSG
TPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNLIVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPG
ESICLVPGVYHSFWGEVGYGEVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAEFVLCNEYCRFV

Specific function: Unknown

COG id: COG3822

COG function: function code R; ABC-type sugar transport system, auxiliary component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26134; Mature: 26134

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGG
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEECC
NHFFTQGLTLFTLRNGSVSGTPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNL
CEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCEE
IVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPGESICLVPGVYHSFWGEVGYG
EEEECCCCCCCCCCCCCEEEEECCCCCHHCCCCEEEECCCCCEEECCCHHHHHHCCCCCC
EVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAEFVLCNEYCRFV
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCC
>Mature Secondary Structure
MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGG
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEECC
NHFFTQGLTLFTLRNGSVSGTPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNL
CEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCEE
IVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPGESICLVPGVYHSFWGEVGYG
EEEECCCCCCCCCCCCCEEEEECCCCCHHCCCCEEEECCCCCEEECCCHHHHHHCCCCCC
EVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAEFVLCNEYCRFV
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA