| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51598044
Identifier: 51598044
GI number: 51598044
Start: 4453838
End: 4454443
Strand: Reverse
Name: 51598044
Synonym: YPTB3754
Alternate gene names: NA
Gene position: 4454443-4453838 (Counterclockwise)
Preceding gene: 51598045
Following gene: 51598043
Centisome position: 93.88
GC content: 51.82
Gene sequence:
>606_bases ATGTATCAGGTGAATTTCTTGCCGTGGCGTCTTGTCCGGCAACAGGCTCGCTACCGGTTCTGGCGCAATACCATGCTGAT CCAAGGTATTGGCTTGGCTCTCTATCTGGTGGTGGTGCTAATGCAGGCCCGCAGTGAACACAAACACCGGCAAGGCACGG CGGCGGCATTATCACAGCAGCAGGCTGCATTAAGCCAACGTCAACAGCAAGTGCAGCAGGCAATGGCGCAGTTGCAGCGG ATAAAACAGCATATTCAGCGCTACCATCAGGCTCATCAACCTGCCCGAGGTTACTCCATATTATTGCAACAGCTATCACA GCAGATCCCTGAACGTTGCTGGCTGATGGCCCTAAGGCAGCAAGGTGATGTGCTGTCTTTCGAGGTTATTAGCCGGGATT ACGCCACAATTAATGCATTTTTAGCGATGTTAGGCCGTCAGCCTCTTTTGGTTAATGTGAGCTTGCAGGGGATTACTCAA CAGGATGAGGGCGGTTTTCGTTTCGTGGTGCATGCCTCTTGGCGGGACGAAAACCATCATGTAGAAGGCCATCATGCAGA AGGCCATGATATCGACGGTCATCATGTGGCAGGGGACTATGAATAA
Upstream 100 bases:
>100_bases ATCAACCCCCATTACCCGCGTTACCGGCAGCTTTTACTTTGGCCGGGGGGCTGGCGGTACGTGCGGCAGACTCTTTATCT GCTGCGGGTGCGGGCTACTG
Downstream 100 bases:
>100_bases ATCATTACAGCGTTGTATGGATAGGCCAGGTTGGCAGCTTTGTTTATGGCAGTGGTTTTTTTTAAGCCTGCTCGGGGTTA TCGCTTACGGTGGGTTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MYQVNFLPWRLVRQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQQAALSQRQQQVQQAMAQLQR IKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQQGDVLSFEVISRDYATINAFLAMLGRQPLLVNVSLQGITQ QDEGGFRFVVHASWRDENHHVEGHHAEGHDIDGHHVAGDYE
Sequences:
>Translated_201_residues MYQVNFLPWRLVRQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQQAALSQRQQQVQQAMAQLQR IKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQQGDVLSFEVISRDYATINAFLAMLGRQPLLVNVSLQGITQ QDEGGFRFVVHASWRDENHHVEGHHAEGHDIDGHHVAGDYE >Mature_201_residues MYQVNFLPWRLVRQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQQAALSQRQQQVQQAMAQLQR IKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQQGDVLSFEVISRDYATINAFLAMLGRQPLLVNVSLQGITQ QDEGGFRFVVHASWRDENHHVEGHHAEGHDIDGHHVAGDYE
Specific function: Unknown
COG id: COG3166
COG function: function code NU; Tfp pilus assembly protein PilN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23319; Mature: 23319
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQVNFLPWRLVRQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAALSQRQQQVQQAMAQLQRIKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QGDVLSFEVISRDYATINAFLAMLGRQPLLVNVSLQGITQQDEGGFRFVVHASWRDENHH CCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCC VEGHHAEGHDIDGHHVAGDYE CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYQVNFLPWRLVRQQARYRFWRNTMLIQGIGLALYLVVVLMQARSEHKHRQGTAAALSQQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAALSQRQQQVQQAMAQLQRIKQHIQRYHQAHQPARGYSILLQQLSQQIPERCWLMALRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QGDVLSFEVISRDYATINAFLAMLGRQPLLVNVSLQGITQQDEGGFRFVVHASWRDENHH CCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCC VEGHHAEGHDIDGHHVAGDYE CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA