| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is fepA [C]
Identifier: 51598027
GI number: 51598027
Start: 4433551
End: 4435596
Strand: Reverse
Name: fepA [C]
Synonym: YPTB3737
Alternate gene names: 51598027
Gene position: 4435596-4433551 (Counterclockwise)
Preceding gene: 51598029
Following gene: 51598024
Centisome position: 93.49
GC content: 50.68
Gene sequence:
>2046_bases ATGATATCTGGGAAAAATAAAGTCTGTAAAAAGAAGTTATTAGCGTGTGCGGTTACTTCGGCTATTTCTGCCTTTGCTTC AAATGCCATTGCCGATACTACGAGTCTGGCTGCAATGAATCGCTCAGCCATTAATATATCAAGCACGCATAACAGTAATA AAAAACTCAATGACGCTGATGTCATCACGGTAACAGCCCCTCTGTATTCGCCACTGGTGGTTGCCACATCGCCTAAAGTG CCCCGCCAGCCAGTACCGGCCAGTGACGGTGCTGATTATCTGAGGACCATTCCCGGTTTTTCACTCGTCCGTAACGGGGG GACCAATGGTGATGTGGTGTTCCGTGGCATGTTCGGCTCACGGCTAAAAATTCTGACCGATGGTGCTGAGATTTTGGGTA CCTGCCCATCGCGAATGGATGCGCCAACCTCGTATATTTCACCAGAAAATTTTGATCTACTCACGGTCGTCAAAGGGCCG CAATCGGTGCTGTGGGGGCCGGGGGCTTCTGCCGGGACCATTTTATTTGAACGGGAGCGCCCACATTTTGACCAGTCTGG CGTCAAAGGTAATGCCAGTGTGTTAGCCGGTTCTAATGGGCGCTGGGATAAAAATCTTGATGCCAGTTTGGGTAATGAGC AGGGCTATCTGCGGATGATGGGGAATCAGTCTCGAGCTGCTGATTATAAAGACGGTAACAATGTCCGCGTGCCCTCTCAA TGGGATAAGTGGAATGCCGATATGGCGTTGGGCTGGACACCCGATACCGATACATTACTTGAGCTGTCGGTAGGAAAAGG GAATGGTGAATCCCGCTATGGCGGTCGCGGTATGGATGGTTCTCAGTTCCTGCGTGAGAGCCTGGCGGCCCGCGTTGAGA AAAGTAATATTGGCGAGGTGCTGGATAAGATCGAAGCCAAAATTAACTACACCTACGTAAATCATATTATGGATAACAAG ACCTTACGTACCCCACCGATGATGGCGATGTCTAGCAATCTGGACCGGCGGATGCTCGGCGGTCGGGTCATGGGGACCTG GCTGTGGCAGGACCTAAAGCTGGACGCGGGTACCGATATGCAAACCAATACACACCGCAAGAATAAACAGGGGAACTGGG ATAAAAACGCCCGTTTTATGAATAACGGGGTGTTCGGTGAGTTAACCTGGGCGGCAAGTGAACAAAATAAACTGATCAGC GGGGCGCGTCTTGACCGTCACCAAGTGACGAATTATACCCGCGCAGGTGAGCCGACGCGCTCTGCTACCCTCCCCGCTGC CTTTATGCGTGTTGAGCATAATCTGGCTAATGCACCGGTGATGTTGTATGCCGGCTTGGGGCATACCGAGCGTTTTCCTG ACTATTGGGAACTGTTTTCGCCAAAATTCGGGCCAGCAGGCTCTACTAGCGCCTTTGAGGGTGTAAAAAGCGAAAAAACC ACGCAGATTGATATCGGTGGCCAATACAGCGGTGAACAATTTAGGGGGTGGCTCTCCGCTTATATTGGCCGGGTTAATGA TTTTATCCTGTTTAAATATGATCCAAAAAATCTACGCATCAGCCAGGCCGATAATATTAACGCAACCATTATGGGCGGCG AGATGGGGATGGAATATGCCCTCACCCCGTATTGGAAGGCTGATGCCAGTCTGGCTTATGCCTGGGGGGAAAATACCCGT GATAACCGGCCATTGCCGCAAATTCCACCACTTGAGGCGCGGTTAGGGCTGACATTTGAAGCAGGCGACTGGAGCAGTTC CGCCTTATGGCGTTTGGTCAATAGCCAGCACCGGGTGGCGATCAACGAAGGGAATGTCGTCGGTAAAGATTTTTCCAGCA GTGCGGGGTTCGGCGTACTGTCGGCTAACGTCGCCTATAAGGTGAATAAGCAAGTGAAGTTAAGTAGCGGCATCGATAAT TTGCTGAATAAGGCTTACAGCGAACATCTTAATCTGGCGGGTAATAGCGGTTTTGGTTATTCAGTTAATACCCCTCTGAA TGAGCCTGGCCGCACTCTCTGGGCAAAGCTAAACCTAACATTCTAA
Upstream 100 bases:
>100_bases GATCCAATTATTCCTGATAGAAAGCGAAAAAATATAAAACCACTTTTCTGGCATGGGTAAATATCCCGCCGGAACAATGT GTATTGCCTAAGGGGAAGTA
Downstream 100 bases:
>100_bases GGGGCTGAATGCGCTAGCAGAACGTGGCAGGCCATGGCTTGCCACGTTAATAACAATTAATACCAATAACAATTAATACC AATAACAATTAATACCAATA
Product: iron siderophore receptor/tonB dependent transporter
Products: NA
Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Copper Receptor OprC; Outer Membrane Protein C; Outer Membrane Receptor Protein; Outer Membrane Protein OprC; Outer Membrane Protein; Outer Membrane Protein OprC Complement; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Protein Nosa; B12 Family nB-Dependent Receptor; Nb-Dependent Copper Receptor; N-B Dependent Receptor; NB-Dependent Receptor Plug Domain-Containing; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; NB-Dependent Copper Receptor Protein; Membrane Receptor Protein; NB-Dependent Receptor Domain Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MISGKNKVCKKKLLACAVTSAISAFASNAIADTTSLAAMNRSAINISSTHNSNKKLNDADVITVTAPLYSPLVVATSPKV PRQPVPASDGADYLRTIPGFSLVRNGGTNGDVVFRGMFGSRLKILTDGAEILGTCPSRMDAPTSYISPENFDLLTVVKGP QSVLWGPGASAGTILFERERPHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNVRVPSQ WDKWNADMALGWTPDTDTLLELSVGKGNGESRYGGRGMDGSQFLRESLAARVEKSNIGEVLDKIEAKINYTYVNHIMDNK TLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLDAGTDMQTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQNKLIS GARLDRHQVTNYTRAGEPTRSATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGVKSEKT TQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEMGMEYALTPYWKADASLAYAWGENTR DNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNSQHRVAINEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLSSGIDN LLNKAYSEHLNLAGNSGFGYSVNTPLNEPGRTLWAKLNLTF
Sequences:
>Translated_681_residues MISGKNKVCKKKLLACAVTSAISAFASNAIADTTSLAAMNRSAINISSTHNSNKKLNDADVITVTAPLYSPLVVATSPKV PRQPVPASDGADYLRTIPGFSLVRNGGTNGDVVFRGMFGSRLKILTDGAEILGTCPSRMDAPTSYISPENFDLLTVVKGP QSVLWGPGASAGTILFERERPHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNVRVPSQ WDKWNADMALGWTPDTDTLLELSVGKGNGESRYGGRGMDGSQFLRESLAARVEKSNIGEVLDKIEAKINYTYVNHIMDNK TLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLDAGTDMQTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQNKLIS GARLDRHQVTNYTRAGEPTRSATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGVKSEKT TQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEMGMEYALTPYWKADASLAYAWGENTR DNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNSQHRVAINEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLSSGIDN LLNKAYSEHLNLAGNSGFGYSVNTPLNEPGRTLWAKLNLTF >Mature_681_residues MISGKNKVCKKKLLACAVTSAISAFASNAIADTTSLAAMNRSAINISSTHNSNKKLNDADVITVTAPLYSPLVVATSPKV PRQPVPASDGADYLRTIPGFSLVRNGGTNGDVVFRGMFGSRLKILTDGAEILGTCPSRMDAPTSYISPENFDLLTVVKGP QSVLWGPGASAGTILFERERPHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNVRVPSQ WDKWNADMALGWTPDTDTLLELSVGKGNGESRYGGRGMDGSQFLRESLAARVEKSNIGEVLDKIEAKINYTYVNHIMDNK TLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLDAGTDMQTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQNKLIS GARLDRHQVTNYTRAGEPTRSATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGVKSEKT TQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEMGMEYALTPYWKADASLAYAWGENTR DNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNSQHRVAINEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLSSGIDN LLNKAYSEHLNLAGNSGFGYSVNTPLNEPGRTLWAKLNLTF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74395; Mature: 74395
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISGKNKVCKKKLLACAVTSAISAFASNAIADTTSLAAMNRSAINISSTHNSNKKLNDAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC VITVTAPLYSPLVVATSPKVPRQPVPASDGADYLRTIPGFSLVRNGGTNGDVVFRGMFGS EEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHHEEECCCCCCCEEEEECCCC RLKILTDGAEILGTCPSRMDAPTSYISPENFDLLTVVKGPQSVLWGPGASAGTILFERER EEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEEEECCC PHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNVRVPSQ CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCC WDKWNADMALGWTPDTDTLLELSVGKGNGESRYGGRGMDGSQFLRESLAARVEKSNIGEV CCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LDKIEAKINYTYVNHIMDNKTLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLDAGTDM HHHHHHHEEEEEEEHHHCCCCCCCCCCHHHHCCCCHHHHCCEEEEEHHHEEEEECCCCCC QTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQNKLISGARLDRHQVTNYTRAGEPTR CCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCC SATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGVKSEKT CCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHCCCCCCCC TQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEMGMEYA EEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCEEEEEECCCCCCEE LTPYWKADASLAYAWGENTRDNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNSQHRVA ECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHCCCCEEE INEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLSSGIDNLLNKAYSEHLNLAGNSGFGY EECCCEECCCCCCCCCCEEEECCEEEEECCEEEECCCHHHHHHHHHHHHCCCCCCCCCCE SVNTPLNEPGRTLWAKLNLTF EECCCCCCCCCEEEEEEEECC >Mature Secondary Structure MISGKNKVCKKKLLACAVTSAISAFASNAIADTTSLAAMNRSAINISSTHNSNKKLNDAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC VITVTAPLYSPLVVATSPKVPRQPVPASDGADYLRTIPGFSLVRNGGTNGDVVFRGMFGS EEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHHEEECCCCCCCEEEEECCCC RLKILTDGAEILGTCPSRMDAPTSYISPENFDLLTVVKGPQSVLWGPGASAGTILFERER EEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEEEECCC PHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNVRVPSQ CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCC WDKWNADMALGWTPDTDTLLELSVGKGNGESRYGGRGMDGSQFLRESLAARVEKSNIGEV CCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LDKIEAKINYTYVNHIMDNKTLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLDAGTDM HHHHHHHEEEEEEEHHHCCCCCCCCCCHHHHCCCCHHHHCCEEEEEHHHEEEEECCCCCC QTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQNKLISGARLDRHQVTNYTRAGEPTR CCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCC SATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGVKSEKT CCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHCCCCCCCC TQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEMGMEYA EEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCEEEEEECCCCCCEE LTPYWKADASLAYAWGENTRDNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNSQHRVA ECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHCCCCEEE INEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLSSGIDNLLNKAYSEHLNLAGNSGFGY EECCCEECCCCCCCCCCEEEECCEEEEECCEEEECCCHHHHHHHHHHHHCCCCCCCCCCE SVNTPLNEPGRTLWAKLNLTF EECCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA