| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is bfd
Identifier: 51597991
GI number: 51597991
Start: 4398478
End: 4398684
Strand: Reverse
Name: bfd
Synonym: YPTB3701
Alternate gene names: 51597991
Gene position: 4398684-4398478 (Counterclockwise)
Preceding gene: 51597992
Following gene: 51597990
Centisome position: 92.71
GC content: 44.93
Gene sequence:
>207_bases ATGAGTCTTTTTATGTACGTTTGTCTATGTAATGCGGTTTCTGACAAAGTCATTCGCAAAGCTGTGCGCCAGCATCAGCC CCATACAGTTAAGCAACTGCGACAGCTTGTGCCGATTGGTAGTGACTGTGGGAAGTGCATCCGACAAGCCAGAGAGATCT TGATTGAGGAACTCGCTAATATTCCAGAAATGAATGATGTTGCCTAA
Upstream 100 bases:
>100_bases AAACCAAAGGGTGCCTCGGCACCCTTTTTTATTGATAAAGTGAATAATCTTAATTGAAATAAAACTCATTCTTATTTACA CTCAAAAGACTGGTTAAGAA
Downstream 100 bases:
>100_bases TAGTTAGCTCGGAGAAGTTTTCCGCATACTTTGCCATCTGGTACTACACTGTTAGTACTGGAAGCGGAGGGTATAACTAT GAAAGGTGATAAAAAGATAA
Product: bacterioferritin-associated ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MSLFMYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELANIPEMNDVA
Sequences:
>Translated_68_residues MSLFMYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELANIPEMNDVA >Mature_67_residues SLFMYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELANIPEMNDVA
Specific function: Seems to associate with BFR; could be a general redox and/or regulatory component participating in the iron storage mobilization functions of BFR. Could participate in the release or the delivery of iron from/to bacterioferritin (or other iron complexes)
COG id: COG2906
COG function: function code P; Bacterioferritin-associated ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789735, Length=64, Percent_Identity=54.6875, Blast_Score=89, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007419 [H]
Pfam domain/function: PF04324 Fer2_BFD [H]
EC number: NA
Molecular weight: Translated: 7722; Mature: 7591
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFMYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELAN CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC IPEMNDVA CCCCCCCC >Mature Secondary Structure SLFMYVCLCNAVSDKVIRKAVRQHQPHTVKQLRQLVPIGSDCGKCIRQAREILIEELAN HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC IPEMNDVA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA