| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597919
Identifier: 51597919
GI number: 51597919
Start: 4321182
End: 4321979
Strand: Reverse
Name: 51597919
Synonym: YPTB3628
Alternate gene names: NA
Gene position: 4321979-4321182 (Counterclockwise)
Preceding gene: 51597920
Following gene: 51597918
Centisome position: 91.09
GC content: 50.13
Gene sequence:
>798_bases ATGAGACAACGGTTAAAGAGTGTCCTCGCACTGCTGGACAATGACTCAACCGAACAACTGATCCATCGCTTTCTGACGAT TAACCACCACCGCCAACGATTTAGCGCCCTGATGGTGTCGATGTTTAACGCCAGTGAAGGGCGTCTTGATTGTTATCACC AGCCGGATGGCGGCATGAACGTTGCGTTGAAGCTGGATGCGAATATTGAAGATGTTAACCATCCGTTGGTTCGGGTTTTG CGCAATGGTTTCCCCGAAGTGTGGGGCAGCCTGTATCAGGGGGTACGCATCGAAGATGATGATTTTCGCAGCTTCATTCA GGCGTTACCCACGAGGTGTGGGCTGTACGCCTTACCGCTGTTTGACGTTCATGGACATGCCTGCGGCGTGATTGCGGTTT TTTCCGAAAATATCGAACGCTTCGCTGATACTCGCGGCATATTTAGTATTTATTGCCACATCTTTCAGCATCGCCTGAAC AAATTACAGGAGATGGACCAACTGAGATCGCAATTTAATCAGATCCGAACGGTATTTAAAGAGCAGCGACAGCGGGAAAA GCAATTAGATGAGTTATTGGTCTCGCTCAGTACCTCAGATACGCACGCCTTGCCCGGAATCTCTCAAGACTACAGCAAAA TAGACAGCCTGACCACGGCGGTCGAGACCTTCGAATGTGCTGTATTGACCCAGCGCCAGCGCCTGTACGGTAATGACAAA AGCCGTATTGCGGCCAGTTTGGGGCTATCACTGCGCGCCTTGACGTATAAGTTAGCGAAATACAGGTGCCAGCTATGA
Upstream 100 bases:
>100_bases CTCTGTTGTTATTACAGAAAGTGGCCGCTGGCACCGCTATCAGCCACATTCGGATCGCGGTAGAGGGGAATGTGTTTACT GCACAGGTTGAGGGAGCGAT
Downstream 100 bases:
>100_bases ACACGTGGTTATTGATTAGCTCGTTACTGTTTTCCGGCGGCCATACCGGCGCTTTTTGGACGATGGGATTAACCCCCCCG GTGGCGGAAAAAGAGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMNVALKLDANIEDVNHPLVRVL RNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPLFDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLN KLQEMDQLRSQFNQIRTVFKEQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK SRIAASLGLSLRALTYKLAKYRCQL
Sequences:
>Translated_265_residues MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMNVALKLDANIEDVNHPLVRVL RNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPLFDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLN KLQEMDQLRSQFNQIRTVFKEQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK SRIAASLGLSLRALTYKLAKYRCQL >Mature_265_residues MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMNVALKLDANIEDVNHPLVRVL RNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPLFDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLN KLQEMDQLRSQFNQIRTVFKEQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK SRIAASLGLSLRALTYKLAKYRCQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30478; Mature: 30478
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMN CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE VALKLDANIEDVNHPLVRVLRNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPL EEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECH FDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLNKLQEMDQLRSQFNQIRTVFK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SRIAASLGLSLRALTYKLAKYRCQL HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLDCYHQPDGGMN CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE VALKLDANIEDVNHPLVRVLRNGFPEVWGSLYQGVRIEDDDFRSFIQALPTRCGLYALPL EEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECH FDVHGHACGVIAVFSENIERFADTRGIFSIYCHIFQHRLNKLQEMDQLRSQFNQIRTVFK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQRQREKQLDELLVSLSTSDTHALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDK HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SRIAASLGLSLRALTYKLAKYRCQL HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA