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The map label for this gene is ssuC

Identifier: 51597894

GI number: 51597894

Start: 4287017

End: 4287814

Strand: Reverse

Name: ssuC

Synonym: YPTB3603

Alternate gene names: 51597894

Gene position: 4287814-4287017 (Counterclockwise)

Preceding gene: 51597895

Following gene: 51597893

Centisome position: 90.37

GC content: 53.51

Gene sequence:

>798_bases
ATGATGACAATCAGTGCACAACGAATTCTGCATCGGCTGGCCCCTTGGATTTTGCCCGTGGCGTTGGTGGTTGGCTGGCA
AGTCGCGGTTGAGGCGGGTTGGTTATCCAACCGCATATTACCTGCGCCAAGTGCCGTAGTGACCGCATTTTGGGCACTGA
CCAAAAGTGGTGAGCTGTGGCAACACCTGACTATCAGCAGTTGGCGTGCCCTGATTGGTTTTAGCATCGGTGGCAGCATC
GGATTAGTGTTGGGGGTCATCACGGGGTTGTCTCGCTGGGGAGAGCGGTTACTCAATAGCTCGGTCCAGATGATCCGGAA
TGTCCCGCATCTGGCACTGATCCCGCTGGTGATCCTGTGGTTCGGCATTGACGAATCCGCCAAAATTTTTCTGGTGGCAC
TCGGGACGTTGTTCCCTATTTATCTGAACACCTATCACGGTATTAAGAATATTGACAGTGGCCTACTGGAAATGGCGCGC
AGTTATGGGCTGAGCGGTTTTCGATTATTGACGCAAGTGGTGCTGCCAGGCGCGTTGCCATCGATCATGGTCGGTGTGCG
TTTTGCGCTCGGATTTATGTGGCTGACGCTTATCGTGGCTGAAACCATTTCCGCCAATTCGGGTATTGGTTATCTGGCAA
TGAACGCCCGTGAATTTCTCCAGACCGATGTGGTGGTGGTGGCCATTGTTCTGTATGCCTTACTCGGCAAACTGGCCGAT
GGCAGTGCACAACTGCTCGAGCGAGTCTGGTTGCGTTGGCATCCGGCCTATCAACAGAAATCAGGAGAAGCGCAATGA

Upstream 100 bases:

>100_bases
CCACCGAGCTACCGACGCAGCGGCCTGCAACCCAACCGCAAGGTGAAGTAGTCGCCAATATTTATGTGCCACAAAAAGTC
TCGCAAAGCTGAGGAGAAAC

Downstream 100 bases:

>100_bases
CCACACTGACTCATATCCCGCAAGGGACGCCAATAACGTTGGAGTCGATCGGCAAACGTTATGGTAATCGTACTGTTTTA
GATAATCTGCAACTGCGTAT

Product: ABC aliphatic sulfonates transporter, permease subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MMTISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSI
GLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMAR
SYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD
GSAQLLERVWLRWHPAYQQKSGEAQ

Sequences:

>Translated_265_residues
MMTISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSI
GLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMAR
SYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD
GSAQLLERVWLRWHPAYQQKSGEAQ
>Mature_265_residues
MMTISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSI
GLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMAR
SYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD
GSAQLLERVWLRWHPAYQQKSGEAQ

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=261, Percent_Identity=79.3103448275862, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI1786564, Length=246, Percent_Identity=34.9593495934959, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789033, Length=184, Percent_Identity=28.804347826087, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29012; Mature: 29012

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHH
QHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILW
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FGIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALP
HCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
SIMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
GSAQLLERVWLRWHPAYQQKSGEAQ
CHHHHHHHHHHHHCCHHHCCCCCCC
>Mature Secondary Structure
MMTISAQRILHRLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHH
QHLTISSWRALIGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILW
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FGIDESAKIFLVALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALP
HCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
SIMVGVRFALGFMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
GSAQLLERVWLRWHPAYQQKSGEAQ
CHHHHHHHHHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]