Click here to switch to the map view.

The map label for this gene is yhaK [H]

Identifier: 51597783

GI number: 51597783

Start: 4155996

End: 4156700

Strand: Direct

Name: yhaK [H]

Synonym: YPTB3491

Alternate gene names: 51597783

Gene position: 4155996-4156700 (Clockwise)

Preceding gene: 51597781

Following gene: 51597785

Centisome position: 87.59

GC content: 51.35

Gene sequence:

>705_bases
ATGATCACATGCAGAACAGCAGAACAGTGCGGGCAGGCTGACTTTGGTTGGCTTCAGGCGCGTTATACCTTCTCTTTCGG
CCACTATTTCGATCCTACATTATTAGGCTATGCCTCGTTGCGGGTCCTAAACCAAGAAGTATTAGCACCCGGTGCCGCAT
TCCAACCACGGACTTATCCGCAAGTTGATATTCTCAACCTGATTTTACAAGGCGAAGCAGAGTACCGGGATAGTCTGGGG
AATCATGTGCACGCCAAGACAGGCGATGCTCTGTTATTTTCGCCTCAGCAAGGGGTCAGTTACAGTGAGCACAATCTGAG
TGCCAATAAATCATTAACCCGTATTCAGCTATGGCTTAATGCCTGCCCTGAACGGGAAAGTGCTCCAACGCAGCACCAGA
GATTAAGCACTCGCCCTGTGCAGTTGCTCGCCTCACCAGCCGGTGAGCAAGGTAGCCTACAGCTACGCCAGCAAATGTGG
ATACATCACCTGGCATTAGCGGCTGGAGAACAACAAAAGATGCCATTACACGGCCACAGAGCATACTTACAGTCGATTCA
TGGGACAGTAGACGTCGCTGGCCCGCAAACGGGGACATCACAGCGCCTAACGTGTGGTGATGGGGCCTTTGTGGAAGAAG
AACAACACCTGGTGATTAAAGCGATAACCCCACTGCGCGCCCTCTTGATTGATTTACCGGTTTAG

Upstream 100 bases:

>100_bases
GAACCGGTTGCCGCAGTCTTGCAGAGGCGAACCGATGGAGAGGCCGACAGACTCCTTCCTGTGGCTTGAAAGATGACCGG
TATAAGAGGTAATCATCGTC

Downstream 100 bases:

>100_bases
TTCTCTCGCCGTTGCCTGATACCGATGTATTCGCTCGCGCCCTATCCTGCAAAGCAAAAACCCGCCAAAGCGGGATTTTG
TGGCATGAGTGGCGTTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MITCRTAEQCGQADFGWLQARYTFSFGHYFDPTLLGYASLRVLNQEVLAPGAAFQPRTYPQVDILNLILQGEAEYRDSLG
NHVHAKTGDALLFSPQQGVSYSEHNLSANKSLTRIQLWLNACPERESAPTQHQRLSTRPVQLLASPAGEQGSLQLRQQMW
IHHLALAAGEQQKMPLHGHRAYLQSIHGTVDVAGPQTGTSQRLTCGDGAFVEEEQHLVIKAITPLRALLIDLPV

Sequences:

>Translated_234_residues
MITCRTAEQCGQADFGWLQARYTFSFGHYFDPTLLGYASLRVLNQEVLAPGAAFQPRTYPQVDILNLILQGEAEYRDSLG
NHVHAKTGDALLFSPQQGVSYSEHNLSANKSLTRIQLWLNACPERESAPTQHQRLSTRPVQLLASPAGEQGSLQLRQQMW
IHHLALAAGEQQKMPLHGHRAYLQSIHGTVDVAGPQTGTSQRLTCGDGAFVEEEQHLVIKAITPLRALLIDLPV
>Mature_234_residues
MITCRTAEQCGQADFGWLQARYTFSFGHYFDPTLLGYASLRVLNQEVLAPGAAFQPRTYPQVDILNLILQGEAEYRDSLG
NHVHAKTGDALLFSPQQGVSYSEHNLSANKSLTRIQLWLNACPERESAPTQHQRLSTRPVQLLASPAGEQGSLQLRQQMW
IHHLALAAGEQQKMPLHGHRAYLQSIHGTVDVAGPQTGTSQRLTCGDGAFVEEEQHLVIKAITPLRALLIDLPV

Specific function: Does not have quercetin 2,3-dioxygenase activity [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789493, Length=234, Percent_Identity=68.8034188034188, Blast_Score=324, Evalue=3e-90,
Organism=Escherichia coli, GI1789847, Length=237, Percent_Identity=33.3333333333333, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: NA

Molecular weight: Translated: 25885; Mature: 25885

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITCRTAEQCGQADFGWLQARYTFSFGHYFDPTLLGYASLRVLNQEVLAPGAAFQPRTYP
CCCCCCHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QVDILNLILQGEAEYRDSLGNHVHAKTGDALLFSPQQGVSYSEHNLSANKSLTRIQLWLN
HHHHHHHHHCCCHHHHHHCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEHH
ACPERESAPTQHQRLSTRPVQLLASPAGEQGSLQLRQQMWIHHLALAAGEQQKMPLHGHR
CCCCCCCCCCHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
AYLQSIHGTVDVAGPQTGTSQRLTCGDGAFVEEEQHLVIKAITPLRALLIDLPV
HHHHHHCCEEEECCCCCCCCCEEECCCCCEECCCCCEEEEHHHHHHHHHHCCCC
>Mature Secondary Structure
MITCRTAEQCGQADFGWLQARYTFSFGHYFDPTLLGYASLRVLNQEVLAPGAAFQPRTYP
CCCCCCHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QVDILNLILQGEAEYRDSLGNHVHAKTGDALLFSPQQGVSYSEHNLSANKSLTRIQLWLN
HHHHHHHHHCCCHHHHHHCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEHH
ACPERESAPTQHQRLSTRPVQLLASPAGEQGSLQLRQQMWIHHLALAAGEQQKMPLHGHR
CCCCCCCCCCHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
AYLQSIHGTVDVAGPQTGTSQRLTCGDGAFVEEEQHLVIKAITPLRALLIDLPV
HHHHHHCCEEEECCCCCCCCCEEECCCCCEECCCCCEEEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]