| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597750
Identifier: 51597750
GI number: 51597750
Start: 4101394
End: 4101894
Strand: Reverse
Name: 51597750
Synonym: YPTB3455
Alternate gene names: NA
Gene position: 4101894-4101394 (Counterclockwise)
Preceding gene: 51597751
Following gene: 51597749
Centisome position: 86.45
GC content: 38.12
Gene sequence:
>501_bases ATGACATTTAATAAAGATCAAGACTATTGGACTCGCTGCTATTGCACCAATGAATTTTTGCTTATTGAAACTCAATCAGG GCTGGGTATGGTCGCTGCGGATAATCTCTTTCCACCTCATTTATTACCACCAGATATAGATAATCAGAGTATTGGTGAGA CTATCTTACAAGCATTGTCAGATAGTCGTACATTGACAGTCAAAGAATGTGAAACATTCTTTGACTTTGAAAAAGGTAAA GAAGAATACGCTGCCTGGGTAGCCATGTTGATGGAAAAATATGGCTATAAAACTAAAAAATCCTTATTTAAAAACATGAA AAACTGCGGTATTCATTGTTTTAATGGTGTTATAACGATCTCACCGACTCGCCATGAAAAACTGGAAGGTTGGGGTAGAG AAAAAGGTGATGGTATTGAGGATGTTATTCTCTCTGTAGACAGTTCCCCAACTGAAATAGGTGCAGGACTACGGCTGGCA TTGAGTCGCTGTAAAGGTTAA
Upstream 100 bases:
>100_bases TTCCCGCCAATACAACTTCAGCTCAATGGACAGAGATAAACCGAGCTATTGAGTATGGGAAAGGGCAAGGCGTTAAGGTT ACTGTGACACAGGTGAAATG
Downstream 100 bases:
>100_bases ACAGAAAATCCTAGTTAGTTGGTCGGGGCTTTTGCTTTTACATATTTTATGACGCGAAGCAGAGCCATGTCAGCGGCGGT ATCAGTGTTCCGGTGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTFNKDQDYWTRCYCTNEFLLIETQSGLGMVAADNLFPPHLLPPDIDNQSIGETILQALSDSRTLTVKECETFFDFEKGK EEYAAWVAMLMEKYGYKTKKSLFKNMKNCGIHCFNGVITISPTRHEKLEGWGREKGDGIEDVILSVDSSPTEIGAGLRLA LSRCKG
Sequences:
>Translated_166_residues MTFNKDQDYWTRCYCTNEFLLIETQSGLGMVAADNLFPPHLLPPDIDNQSIGETILQALSDSRTLTVKECETFFDFEKGK EEYAAWVAMLMEKYGYKTKKSLFKNMKNCGIHCFNGVITISPTRHEKLEGWGREKGDGIEDVILSVDSSPTEIGAGLRLA LSRCKG >Mature_165_residues TFNKDQDYWTRCYCTNEFLLIETQSGLGMVAADNLFPPHLLPPDIDNQSIGETILQALSDSRTLTVKECETFFDFEKGKE EYAAWVAMLMEKYGYKTKKSLFKNMKNCGIHCFNGVITISPTRHEKLEGWGREKGDGIEDVILSVDSSPTEIGAGLRLAL SRCKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18701; Mature: 18569
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFNKDQDYWTRCYCTNEFLLIETQSGLGMVAADNLFPPHLLPPDIDNQSIGETILQALS CCCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC DSRTLTVKECETFFDFEKGKEEYAAWVAMLMEKYGYKTKKSLFKNMKNCGIHCFNGVITI CCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCEEEE SPTRHEKLEGWGREKGDGIEDVILSVDSSPTEIGAGLRLALSRCKG CCCCHHHHHCCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TFNKDQDYWTRCYCTNEFLLIETQSGLGMVAADNLFPPHLLPPDIDNQSIGETILQALS CCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC DSRTLTVKECETFFDFEKGKEEYAAWVAMLMEKYGYKTKKSLFKNMKNCGIHCFNGVITI CCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCEEEE SPTRHEKLEGWGREKGDGIEDVILSVDSSPTEIGAGLRLALSRCKG CCCCHHHHHCCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA