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The map label for this gene is yapF

Identifier: 51597746

GI number: 51597746

Start: 4095115

End: 4097400

Strand: Direct

Name: yapF

Synonym: YPTB3449

Alternate gene names: NA

Gene position: 4095115-4097400 (Clockwise)

Preceding gene: 51597745

Following gene: 51597754

Centisome position: 86.31

GC content: 54.59

Gene sequence:

>2286_bases
ATGAATAACCATAAGATCTGGCGTTTATCCGCCGTTGCTGTTGCTTTACTGATTAGCGGTAATGGCTATGCCGATCAGAC
CTTCCACTTCGCTCAGCAACCGCATAACACGGGCGATCATACTGTGATCGCCGCACCAGAGGTCAATAACTTTTCATTGG
CAGATCTGACCGCCAACGCAGAAGGGCAAGCAGTGGATGCGACCAACGCAGGCGCACTGTCGCTGCGGGTTGAACCCACT
CAAGGTGACGCTCAGGCGAATGGCGTACTGGTCACCTCCGGTACCTTTACTAATCAGGCTCAGGGCTCGATTACCGTGAG
TGCCAGCAGTCAGGATCAACATGCTGTTGCCAGCGGGTTGCAGGCAACGGATGCCTATTGGTCCACTCTGCGTAATCAGG
GTAGCATCCGTGCCACGAGCAACAGCCTACACGGCAGTGCCGAGGCCTATGGTATCCAGGCTGGCCTGGCCTTTTCCGAT
GCCGCCGGGGATCACTACGGTGACCACATGATGTTGAGCAACGAGGGTGTGATGCAGGTGAGTGCCACGGCCGAGCAGGA
CGCCTTTGCCAGCGGTATCTATACCAATGCCGGTAATGGCGTGGTCAACAATGGCCGTCTGGATGTCAGTGCTCATGCCA
GTGCTGGCGATGCACGGGCAACCGGCCTGCATACCCTCTCTGCCAACCCAGGCGTCGATCCCGATCCATGGAACCCCGCT
AACCCCACTCATCTGATGAGCAACAATGGCTCGTTGTCAGTCACGGCCAGCGGTAACAATGCGACCGCAAGCGCGATCAG
TACCGAGGGCGAAGGGGTCTACATCTACAACAACGGGACACTGATCGTTGATGCATTTAGCGAGAGTGCGCAGGGCAGTG
CATCCGCCTATGGTATTCATGTGCTCAACGGCAGTGCCACGATCAACTCCAGCGGCAGAATTTTGGCGACAGCCACCGGC
GGAAGCCAACAGCAAGCCTATGAAGTGATGGCCGACGGTTCGGTAGTTAATATTGAACGCTATACACTCGCCTTGGGCAA
TGAGACACCGTGGGCGGTCAGTAATGGCGGTTCGATCGTGCTGGGTAACGGTACGCAAGGGGCCGATCTGGTGCTAATGG
CTGGGCAGGCCAGTGAAGGTTTCGCCTATGGTAAAGAGTACAGCTTGGACAATCTGGCTTACGATACCACCTCCGGCCAG
CAGAGTACGGTGGGGGGTTCTATTGCGGGGTTGTACGGTATTACGCCTGATATCAAGGTGATTCACAGCGGTAGCAGCAG
TAGTTCGTTGGGATCTGCTGCACTGGTGTATGCACCGGATGTCTCTCATGCCGGAGTCTCCGCATTGGCACAGCGTTCTT
CCATGGAGCAGGCATCCAATATTATCTCCTCGCAACTGCATAGTCAGTTGGTAAGTAACGCCGGTTGTAACCAGAAGTTG
GAGAGTGCCGATAGCTGCGTCTTTATCACACCTTATGCTGGTGAGTACCGTCGTGATCCAGTGACCTCCGGTTACAGCGG
TCAGCGCTATGGGGTATTGCTCGGTCAGAACCAACATTTTGGCGATTTCCAGCTTGGCTGGCACGGCGGTTATGAGAGTG
CCAGCACCGATTTTAATGGTACCTCTGTAGGGCGTAAGGAAGAGATCAATACGCTGATGCTGGGGGTTCAGGGCGGAATG
AAGCTCTCTGAGAGTCTGTTTATTGCAGCGACCAGTACGTGGTTCAGCAGTGACACCGATTACAGTGACAGCAATACCTA
CTACGGCGTGGGTAGCCAGAGCGGCAGCTATGATAGCAGCGGCCTCTACACCGATGTCTCCGTGGGTAATAGCTGGCAGT
TGAATCGCAACTATGCCATGACGCCGATGGTCGGGCTGACGCATATCTGGCAGCAACGCGATGGCTATATTGTCTCATCC
AATAACAGCAACTATGATCTTATCGACACCCGCTATAGCAGCTACAGCGACCATGCAGTCGCTCTCCATGCTGGAGTACG
TCTCGATGGTCGCTATCCACTGACCAACGAGACACTACTTAAGCCGTTCTTTAATGTCGGATTGCAGCAAATGTTGTATG
GCGATGAGATCACCATCGATCAGAGTATCCCTAATTCGCCGGTAGTTGGCGTAAGCACCAAGGATAAAACCACTCAAGGA
ACCTTCGATCTGGGGATGGCACTGGTAAGCGATAACGGTGTGTCTGCCAGCCTACAGCTATCGGGCATGGTCAATAGTGA
TCGTCAGGATTTCACCGGCTGGGCAAATCTGGGCTGGGCGTTCTAG

Upstream 100 bases:

>100_bases
AAGATATTTTCGCCAAAGTCGGCTTTATCCTTAATTTCTAAGCGGCCACATCCTTTTACTAACGATAAAAAATATTGGGC
TAATATTTAGGGAATGACCT

Downstream 100 bases:

>100_bases
AGGGGCAGTTGCGTTAAGATGCTGTCGTATAACATGCAGTTCAGCATCTTAGGCCGCTGACGGCATTCCTACCGCTGTAC
TCCGAGTGCAGCGGCGGGAG

Product: autotransporter protein

Products: NA

Alternate protein names: Outer Membrane Autotransporter

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT
QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSD
AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIHVLNGSATINSSGRILATATG
GSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ
QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM
KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSS
NNSNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF

Sequences:

>Translated_761_residues
MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT
QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSD
AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIHVLNGSATINSSGRILATATG
GSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ
QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM
KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSS
NNSNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
>Mature_761_residues
MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT
QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSD
AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIHVLNGSATINSSGRILATATG
GSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ
QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM
KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSS
NNSNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79497; Mature: 79497

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANA
CCCCEEEEEEEEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCEEEEEEECCC
EGQAVDATNAGALSLRVEPTQGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGL
CCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCC
QATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSDAAGDHYGDHMMLSNEGVMQV
HHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCEEECCCCCCCCCEEEECCCCEEEE
SATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
ECCCCCCHHHCCEEECCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIH
CCCEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEE
VLNGSATINSSGRILATATGGSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIV
EEECCEEECCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEEEECCCCCEEEECCCEEE
LGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQQSTVGGSIAGLYGITPDIKV
ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEE
IHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
EECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNG
HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
TSVGRKEEINTLMLGVQGGMKLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSS
CCCCCHHCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
GLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSSNNSNYDLIDTRYSSYSDHAV
CCEEEEECCCEEEECCCEECCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCEE
ALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
EEEECEEECCCCCCCCCHHHHHHHHHCHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
CCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANA
CCCCEEEEEEEEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCEEEEEEECCC
EGQAVDATNAGALSLRVEPTQGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGL
CCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCC
QATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSDAAGDHYGDHMMLSNEGVMQV
HHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCEEECCCCCCCCCEEEECCCCEEEE
SATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA
ECCCCCCHHHCCEEECCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC
NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIH
CCCEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEE
VLNGSATINSSGRILATATGGSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIV
EEECCEEECCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEEEECCCCCEEEECCCEEE
LGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQQSTVGGSIAGLYGITPDIKV
ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEE
IHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL
EECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNG
HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
TSVGRKEEINTLMLGVQGGMKLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSS
CCCCCHHCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
GLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSSNNSNYDLIDTRYSSYSDHAV
CCEEEEECCCEEEECCCEECCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCEE
ALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG
EEEECEEECCCCCCCCCHHHHHHHHHCHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC
TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
CCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA