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The map label for this gene is ygiM [H]

Identifier: 51597708

GI number: 51597708

Start: 4051604

End: 4052224

Strand: Direct

Name: ygiM [H]

Synonym: YPTB3410

Alternate gene names: 51597708

Gene position: 4051604-4052224 (Clockwise)

Preceding gene: 51597703

Following gene: 51597709

Centisome position: 85.39

GC content: 45.73

Gene sequence:

>621_bases
ATGCAGAAATTACGCCTAATTTGCCTCACGATACTCAGTTTAAGCCTCTCTTGGGGCGCACAAGCTGAAGAAAAACGCTA
TATATCAGATGAACTGGATACTTACGTTCATAGCGGTCCAGGTAACCAATACCGTATTGTCGGCACACTCAAAGGCGGGG
ATGAGGTCACCCTGATAAGCGTTGATAACGGTACAAATTATGGTCAGATCCGTGACAGTAAAGGAAAAACCACGTGGATC
CCATTGAATCAGTTGAGTGAAACGCCAAGCCTGCGCGTTCGTGTACCCGACCTTGAGCAACAGGTTAAAACACTGACCGA
CAAGCTGGCTAATATTGATAATAGCTGGAATCAGCGCACGGCAGAGATGCAACAGAAAGTGGCGGCCAGCGATAGTGTTA
TCTCTGAATTGCAAAAAGAGAATGAATCGCTGAAAAACCAACTCATTGTTGCTCAGAAAAAAGTTAATGCCGTCAATCTA
CAATTGGATGACAAGCAACGCACTATTATTCTTCAATGGTTTATGTACGGCGGTGGTGTTGCGGGGATTGGCCTGCTCCT
TGGTTTAGTGTTGCCACATTTGATCCCAAGCCGTAAGAAGAACAACCGCTGGATGAACTGA

Upstream 100 bases:

>100_bases
GCTGTGAGACTAAGACAGTTCTCATTCCGGTTTATGCGTTGCGTCGGCAAACTGAACGCACTACTATCGTTCCATAAATT
CACTCATAAATGACTCTCTA

Downstream 100 bases:

>100_bases
TCGTCGGCGTTATTCGAGCGAGTAAATCCCGATGAACTTATTGATCAGTAAAATTAACTTGATCAGTAAAATTAACGACA
AGTCAGTGACTCGGGTTATT

Product: signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MQKLRLICLTILSLSLSWGAQAEEKRYISDELDTYVHSGPGNQYRIVGTLKGGDEVTLISVDNGTNYGQIRDSKGKTTWI
PLNQLSETPSLRVRVPDLEQQVKTLTDKLANIDNSWNQRTAEMQQKVAASDSVISELQKENESLKNQLIVAQKKVNAVNL
QLDDKQRTIILQWFMYGGGVAGIGLLLGLVLPHLIPSRKKNNRWMN

Sequences:

>Translated_206_residues
MQKLRLICLTILSLSLSWGAQAEEKRYISDELDTYVHSGPGNQYRIVGTLKGGDEVTLISVDNGTNYGQIRDSKGKTTWI
PLNQLSETPSLRVRVPDLEQQVKTLTDKLANIDNSWNQRTAEMQQKVAASDSVISELQKENESLKNQLIVAQKKVNAVNL
QLDDKQRTIILQWFMYGGGVAGIGLLLGLVLPHLIPSRKKNNRWMN
>Mature_206_residues
MQKLRLICLTILSLSLSWGAQAEEKRYISDELDTYVHSGPGNQYRIVGTLKGGDEVTLISVDNGTNYGQIRDSKGKTTWI
PLNQLSETPSLRVRVPDLEQQVKTLTDKLANIDNSWNQRTAEMQQKVAASDSVISELQKENESLKNQLIVAQKKVNAVNL
QLDDKQRTIILQWFMYGGGVAGIGLLLGLVLPHLIPSRKKNNRWMN

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1605 [H]

Homologues:

Organism=Escherichia coli, GI1789435, Length=206, Percent_Identity=71.8446601941748, Blast_Score=281, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR016476 [H]

Pfam domain/function: PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 23129; Mature: 23129

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLRLICLTILSLSLSWGAQAEEKRYISDELDTYVHSGPGNQYRIVGTLKGGDEVTLIS
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCEEEEEE
VDNGTNYGQIRDSKGKTTWIPLNQLSETPSLRVRVPDLEQQVKTLTDKLANIDNSWNQRT
ECCCCCCCEEECCCCCEEEEEHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHH
AEMQQKVAASDSVISELQKENESLKNQLIVAQKKVNAVNLQLDDKQRTIILQWFMYGGGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEHHCCCH
AGIGLLLGLVLPHLIPSRKKNNRWMN
HHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQKLRLICLTILSLSLSWGAQAEEKRYISDELDTYVHSGPGNQYRIVGTLKGGDEVTLIS
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCEEEEEE
VDNGTNYGQIRDSKGKTTWIPLNQLSETPSLRVRVPDLEQQVKTLTDKLANIDNSWNQRT
ECCCCCCCEEECCCCCEEEEEHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHH
AEMQQKVAASDSVISELQKENESLKNQLIVAQKKVNAVNLQLDDKQRTIILQWFMYGGGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEHHCCCH
AGIGLLLGLVLPHLIPSRKKNNRWMN
HHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]