| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597679
Identifier: 51597679
GI number: 51597679
Start: 4013489
End: 4015045
Strand: Direct
Name: 51597679
Synonym: YPTB3381
Alternate gene names: NA
Gene position: 4013489-4015045 (Clockwise)
Preceding gene: 51597678
Following gene: 51597682
Centisome position: 84.59
GC content: 35.58
Gene sequence:
>1557_bases ATGCAGAAAAAAACAATGATAACTTTCATACTAGAGAAGTGTGAGTTTTTTATTAAAAATAGACAGGGAGCCATTCTATT GTCTTTTATGGCGTTAATCCCTGTTTTTATTGGGTTGATATTTTTGTCGTTTGAATTTTCTCACTTTATCCAAAAGAGAG CTAAACTCTCTGATGCCCTTGAACAAGCATCTTTAGCCTTATCGACAGAAAATAATTATAGGAATGATAGAGCCAGTAAT AATAGAAACAATTATCTGGTTACATCGTACGCACAATCTTATTTACCGTCAGAGCGTTTTTCGCAACCAAGGGTAGTCAA TACCTACAATGAGAGTTTAGGTTACACTGAATATAATGCCAGTCTGCAAATGAATTATCAGTTAGCATTATTAAACTCTT ACTTAAAACAAACCCCCTCGCCGACGTGGGATGTTAACGAAAATGGGGCCGCCAGAAAGTATTTATCATCAATAGCCGAA CCTATAGATGTCGTGTTTGTCACCGATTTTTCCGGATCGATGGATTTACCTTTCGGGGATATTGAGCGAAATAACAGAAT AACTAAACTTGATGAACTAAAAGCGATTTTTGTAAAATTAAATAACCGAATATTTTCAAACGATGGCATTAACACCATTG GGTTTGTTCCCTTCTCATGGGGTACAAAAAGAATATCTGCCAATGGACAGGTATCATCTACTTATTGCCACTTTCCCTAT TCTCCTAAAAAAATAGATAGAAATGGTCATTATCTCCAACGTTATACCGCCTCAAACTTAAAGAATATTCCTGGTTTGGA CAATCTCAGTGGGATAGATAATCTCGCTTACGGTCAATTAGATGAAGATAAACACCACGCTATCCTTAGCGAAATAGAAA AAAAACATAGAGACAATGAAATACCTACTAAAACCAGAGATCAGGCTAAAAATTTTCTTGATAAGGCATATAAAGTAAAT CAAATTTCGACTATCACTAAAATTGTGGAAGAACATATTGATTATAAAGAAACAATAAACTCAATTGACCGAAATGGTGA AACGATTGATATACCAATGGATGACATATTAGATCCATTTTTCTGTCTAAAAGAGACCAACGCAAAATCACTTAACTTTG ATCCTAATTCAAAAGGAGATATAAACGAAATCCTCAATATGAAGGCTGAAGGGGGAACATTAGCCAGCTCAGGAATATTG GTGGGTAACAAAATGCTCACTGAAAGCCAAAATAACAATAAACTGATGATTATCCTGTCTGATGGTGATGATAATACGCA AAAAATGAGTTCTCCACACGATCAGAAAGCGGGCATCATCAATATCACGCAAAAATTGATTACCGAGGGTATGTGTCAGA AAATTAAAGATAATGGCATAAAAATGGTTTTTATCGGGATTGGCTACGTTCCCGATAATAATATTATCGATTGGGAAAAA GACTGTGTAGGGACGGGTAATTTTTATCTGGCAAAAAATGCCCACGAATTAGAAATTAGTATCGAGCGAGCACTGGTTGT TGATGATGAAGTGGGGAGAAATATCCCTAAAAGCTGA
Upstream 100 bases:
>100_bases TCAGAGATACCGTGACCTGATTAGTGTCAGCCCCTTGCCAACATTGAAATCATCGGCCATCACAATCGGGCGCTAAACAG CCTACGAATAAAGGTTATAT
Downstream 100 bases:
>100_bases AATTGACTTAAAAATCGATATTGACCTAAAAACTGAAATTTCCTCAAAAACCAAAGTTGATGCAAGCGCGGTAACAGTAA CCGCGCTTGCAAAAAATTAT
Product: membrane protein.
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadG; Tight Adherance Operon Protein G; Tight Adherance Operon Protein
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MQKKTMITFILEKCEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDALEQASLALSTENNYRNDRASN NRNNYLVTSYAQSYLPSERFSQPRVVNTYNESLGYTEYNASLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAE PIDVVFVTDFSGSMDLPFGDIERNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY SPKKIDRNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNEIPTKTRDQAKNFLDKAYKVN QISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPFFCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGIL VGNKMLTESQNNNKLMIILSDGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS
Sequences:
>Translated_518_residues MQKKTMITFILEKCEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDALEQASLALSTENNYRNDRASN NRNNYLVTSYAQSYLPSERFSQPRVVNTYNESLGYTEYNASLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAE PIDVVFVTDFSGSMDLPFGDIERNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY SPKKIDRNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNEIPTKTRDQAKNFLDKAYKVN QISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPFFCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGIL VGNKMLTESQNNNKLMIILSDGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS >Mature_518_residues MQKKTMITFILEKCEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDALEQASLALSTENNYRNDRASN NRNNYLVTSYAQSYLPSERFSQPRVVNTYNESLGYTEYNASLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAE PIDVVFVTDFSGSMDLPFGDIERNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY SPKKIDRNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNEIPTKTRDQAKNFLDKAYKVN QISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPFFCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGIL VGNKMLTESQNNNKLMIILSDGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58582; Mature: 58582
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKTMITFILEKCEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDAL CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQASLALSTENNYRNDRASNNRNNYLVTSYAQSYLPSERFSQPRVVNTYNESLGYTEYNA HHHHEEEECCCCCCCCCCCCCCCCEEEEHHHHHHCCHHHCCCCCEEECHHHHCCCEEECC SLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAEPIDVVFVTDFSGSMDLPFGD EEEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC IERNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY CCCCCCCCHHHHHHHHHHHHCCEEECCCCCCEEEEEEECCCCEEEECCCCCCCEEEECCC SPKKIDRNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNE CCHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC IPTKTRDQAKNFLDKAYKVNQISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCHHHHCCHH FCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGILVGNKMLTESQNNNKLMIILS HHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCEEECCHHEECCCCCCEEEEEEE DGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCC DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS CCCCCCCEEEECCCEEEEEEEEEEEEEEHHHCCCCCCC >Mature Secondary Structure MQKKTMITFILEKCEFFIKNRQGAILLSFMALIPVFIGLIFLSFEFSHFIQKRAKLSDAL CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQASLALSTENNYRNDRASNNRNNYLVTSYAQSYLPSERFSQPRVVNTYNESLGYTEYNA HHHHEEEECCCCCCCCCCCCCCCCEEEEHHHHHHCCHHHCCCCCEEECHHHHCCCEEECC SLQMNYQLALLNSYLKQTPSPTWDVNENGAARKYLSSIAEPIDVVFVTDFSGSMDLPFGD EEEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC IERNNRITKLDELKAIFVKLNNRIFSNDGINTIGFVPFSWGTKRISANGQVSSTYCHFPY CCCCCCCCHHHHHHHHHHHHCCEEECCCCCCEEEEEEECCCCEEEECCCCCCCEEEECCC SPKKIDRNGHYLQRYTASNLKNIPGLDNLSGIDNLAYGQLDEDKHHAILSEIEKKHRDNE CCHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC IPTKTRDQAKNFLDKAYKVNQISTITKIVEEHIDYKETINSIDRNGETIDIPMDDILDPF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCHHHHCCHH FCLKETNAKSLNFDPNSKGDINEILNMKAEGGTLASSGILVGNKMLTESQNNNKLMIILS HHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCEEECCHHEECCCCCCEEEEEEE DGDDNTQKMSSPHDQKAGIINITQKLITEGMCQKIKDNGIKMVFIGIGYVPDNNIIDWEK CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCC DCVGTGNFYLAKNAHELEISIERALVVDDEVGRNIPKS CCCCCCCEEEECCCEEEEEEEEEEEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA