| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597669
Identifier: 51597669
GI number: 51597669
Start: 4005047
End: 4005943
Strand: Direct
Name: 51597669
Synonym: YPTB3371
Alternate gene names: NA
Gene position: 4005047-4005943 (Clockwise)
Preceding gene: 51597668
Following gene: 51597670
Centisome position: 84.41
GC content: 35.9
Gene sequence:
>897_bases ATGAATCGAAAATTTCTTATATTATTTTCACTCCTGATTGTTGCCATCGGAATCTCCGGCATTCTGTTAAACCCTGATAA AGAGATACCTGAATTACTGACTCAGACGGAGAAAAGAAAAGAGAGAAACATTGTATTAGCCCAAACTCGCCATGACCTTA CCGCCGGTAGATTAATATCTAAAGAAGATTATTCATTACAGAATATCATCGTAGATGAATCAAGTGACTTGGTTAAAAAT GATCTATCACATGGTCATAGAATTGATAGTGATAGCATTGATGGTGATAGCATTGATGGCGATAGAACGGCTGACGATAG AACTCATGATCACAGACTTGATGGCCATTTATTAAAAAACAATATTTTAGCGGGATCGTATATTACCGATGAAATGTTAA TCTCGCCCAGTAGTCGTGAATTTTCCCGGCTAAATTTAAAACACGGGGAGATCATTTATAAATTTTACATTACAGAAAAA AACGAATACCTACTAAACACCTTAAATCCAGGTGACGTTCTTTCATTCCAATTACTGACACTTGAAACGAACAAAACCAA AGGAATGGAAAATGGTATTGCTATTGATAGCAAGAGTATGAATAGTAAACAAAGGCAAAAGTATTCACTTAATAACGTGA TACCTGACATGCCGATATTAAGCATTAAAACGTACTCTCCTGAGGAATTATCAGTAAAAAACAACAAAAACAATAAGACT GAAGCGTATGCCCTAGGATATATTGAAGTGATAATGAAAATACAAGACCTCGAATTCATCCATACGGTGGAAAAAGCCGG TGAGGTGTTTTTAACCCCCAAGAGTGGTGATCACAGACGAATAGATTTGGATGACATAATCCCTACATTACAAACAATAA GAGAGCTAAGAGGATGA
Upstream 100 bases:
>100_bases CTATGCCGTTGCTATCACTGCCGGGTTTCTATCATCTGTACTAATTTAAGTGGCTGAAATAAATTGATTTATCACGATAG CATGACAAAAGGTACGAATA
Downstream 100 bases:
>100_bases ATGTATATAAATTAAAAGATAAAAAACAAAATATAATTTTATTCTTGTCTATTGTTATTCTCTATTTTTTGTTTGAAAAT TCAGCTAACGCCAAGCAAAT
Product: membrane protein.
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGRLISKEDYSLQNIIVDESSDLVKN DLSHGHRIDSDSIDGDSIDGDRTADDRTHDHRLDGHLLKNNILAGSYITDEMLISPSSREFSRLNLKHGEIIYKFYITEK NEYLLNTLNPGDVLSFQLLTLETNKTKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKT EAYALGYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHRRIDLDDIIPTLQTIRELRG
Sequences:
>Translated_298_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGRLISKEDYSLQNIIVDESSDLVKN DLSHGHRIDSDSIDGDSIDGDRTADDRTHDHRLDGHLLKNNILAGSYITDEMLISPSSREFSRLNLKHGEIIYKFYITEK NEYLLNTLNPGDVLSFQLLTLETNKTKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKT EAYALGYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHRRIDLDDIIPTLQTIRELRG >Mature_298_residues MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGRLISKEDYSLQNIIVDESSDLVKN DLSHGHRIDSDSIDGDSIDGDRTADDRTHDHRLDGHLLKNNILAGSYITDEMLISPSSREFSRLNLKHGEIIYKFYITEK NEYLLNTLNPGDVLSFQLLTLETNKTKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKT EAYALGYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHRRIDLDDIIPTLQTIRELRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33889; Mature: 33889
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGRLIS CCCEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHCCEEC KEDYSLQNIIVDESSDLVKNDLSHGHRIDSDSIDGDSIDGDRTADDRTHDHRLDGHLLKN CCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHC NILAGSYITDEMLISPSSREFSRLNLKHGEIIYKFYITEKNEYLLNTLNPGDVLSFQLLT CEEECCEECHHEEECCCCCCHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEE LETNKTKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKT EECCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCC EAYALGYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHRRIDLDDIIPTLQTIRELRG HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRKFLILFSLLIVAIGISGILLNPDKEIPELLTQTEKRKERNIVLAQTRHDLTAGRLIS CCCEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHCCEEC KEDYSLQNIIVDESSDLVKNDLSHGHRIDSDSIDGDSIDGDRTADDRTHDHRLDGHLLKN CCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHC NILAGSYITDEMLISPSSREFSRLNLKHGEIIYKFYITEKNEYLLNTLNPGDVLSFQLLT CEEECCEECHHEEECCCCCCHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEE LETNKTKGMENGIAIDSKSMNSKQRQKYSLNNVIPDMPILSIKTYSPEELSVKNNKNNKT EECCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCC EAYALGYIEVIMKIQDLEFIHTVEKAGEVFLTPKSGDHRRIDLDDIIPTLQTIRELRG HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA