Click here to switch to the map view.

The map label for this gene is gbpA [H]

Identifier: 51597665

GI number: 51597665

Start: 4000604

End: 4002013

Strand: Direct

Name: gbpA [H]

Synonym: YPTB3366

Alternate gene names: 51597665

Gene position: 4000604-4002013 (Clockwise)

Preceding gene: 51597664

Following gene: 51597666

Centisome position: 84.32

GC content: 48.3

Gene sequence:

>1410_bases
ATGATGAAATACAGAACGCCCAATATTATCAGCCGCAACAAAAGTAATGGTATCTCTTCGTTTCATGGCCACGTGTTTTC
TCCCGCTTCACGTGCCTATTTTGCCTGGCTAGCAGGTGAAATTGATGAAGGTGCCCTTAACCAACGCGAGTCCGGTAAAT
TTTTCCCTGAAACAGCCGATAATCTTCCCGATCCCTCTGCAGCTGATGATCAGCCTAATAGTTTGCCCCCATTAGACGGA
AAAATCGCCAGTGCTGGCGAAAGCACTGGGCAAATGTTGGATAACCCTGGCAGTCACTGGACAAAACATGATGTGTTAGC
CGGGGATGTATTAGACGTATCATGGAATTATTCCATGAAACATAAAACCCGCCGCTGGAAATATTTTATGACGCGGACTG
ATTGGAATCCCAATCTTCCTCTTAGCCGAGCTCAGTTTGAAGATAAGCCGTTTTTTATGGTTCAACTGAATGAGCAGCCA
CACTGGTCGGTAGATTCAGAGTTTGCATTAATGCCTCTAGACCCAACAATACATGAGCTAATACTGCCGCAGCGCAGCGG
TTATCATGTTTTACTGGCGGTCTGGGAAGTCGCTAATACCGGCAATGCTTTTTATCATGTTATTGATCTGGACTTCGTGG
GGGAAGGTGGCAGTGATCAACCTCTACCGCCTGCAAACCTACGTGCGACTAACATCACCAAGGATTCAGTATCACTTGCC
TGGAATGCTTCCGTTTCCGATGTCGCTCATTACCAGATTTATCGCGATGGCGTCTTCTTGGCGCAAACAACTACATTGAA
CTGGATTGATTCAAACCTGAAAGCCGGTACCAAATATATCTATACGGTAAGCACGATCGATACAACGGGCATCGCCTCCT
CTCTCAGTTCACCTTTGTTGGTAGAAACGCTAGCGGAGAACAGTGACAACGCACCGCCTTCTGCTCCTAAAAGCTTACAT
AGCATGAACGTAACCGAGAACAGTCTGGAGTTGATGTGGGGAACATCGACGAGTTCGACTGGGCTGAAAAGCTATCTGGT
CTATCGGGAAGGGGAAGAAATTGCTGAGGTTCTGGCACCACAATACACTTTCCAAGAGACCGGATTGTCACCAGATACCA
CCTACCGTTATTTTGTCGCAGCACAGGATACTCAAGGCCGTTTATCCGTACCGAGTAATGTCCATTCTGTTACAACCCAT
GCCAAATCTGGCGGTGGCGGTGATGGTGGCGGTGATGGTGGTAATGGCAGCATCCACCCTGCCTGGGAACTTGGCGCGAC
CTATAACGCTGGCGATAAAGTCAATAATCTCGGTAGAGATTGGGTGTGTCTCGCTTTCCATATAGCCCATGAGCCGACCT
GGGCTCCAGGGGATACAGACTACCACACGCTTTGGACGCTCATTCCGTAA

Upstream 100 bases:

>100_bases
CCACATTATGGCAGCTCGTCGTACAACGCTAAATTTCGCGGGTTCGGTACCTTATACCCTAAAGAATTCCACTGAAAAAA
TTAATATTATTAAGGAATAT

Downstream 100 bases:

>100_bases
TCGCTGTTTTGATAAACATAGCTAATGAGTTTAGCGATAAGGTTAATAAAAGGGTCAGCATTGCTGGCCTTTTACTTTTA
TTTTTACTCTTACTGCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MMKYRTPNIISRNKSNGISSFHGHVFSPASRAYFAWLAGEIDEGALNQRESGKFFPETADNLPDPSAADDQPNSLPPLDG
KIASAGESTGQMLDNPGSHWTKHDVLAGDVLDVSWNYSMKHKTRRWKYFMTRTDWNPNLPLSRAQFEDKPFFMVQLNEQP
HWSVDSEFALMPLDPTIHELILPQRSGYHVLLAVWEVANTGNAFYHVIDLDFVGEGGSDQPLPPANLRATNITKDSVSLA
WNASVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLLVETLAENSDNAPPSAPKSLH
SMNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLAPQYTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVHSVTTH
AKSGGGGDGGGDGGNGSIHPAWELGATYNAGDKVNNLGRDWVCLAFHIAHEPTWAPGDTDYHTLWTLIP

Sequences:

>Translated_469_residues
MMKYRTPNIISRNKSNGISSFHGHVFSPASRAYFAWLAGEIDEGALNQRESGKFFPETADNLPDPSAADDQPNSLPPLDG
KIASAGESTGQMLDNPGSHWTKHDVLAGDVLDVSWNYSMKHKTRRWKYFMTRTDWNPNLPLSRAQFEDKPFFMVQLNEQP
HWSVDSEFALMPLDPTIHELILPQRSGYHVLLAVWEVANTGNAFYHVIDLDFVGEGGSDQPLPPANLRATNITKDSVSLA
WNASVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLLVETLAENSDNAPPSAPKSLH
SMNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLAPQYTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVHSVTTH
AKSGGGGDGGGDGGNGSIHPAWELGATYNAGDKVNNLGRDWVCLAFHIAHEPTWAPGDTDYHTLWTLIP
>Mature_469_residues
MMKYRTPNIISRNKSNGISSFHGHVFSPASRAYFAWLAGEIDEGALNQRESGKFFPETADNLPDPSAADDQPNSLPPLDG
KIASAGESTGQMLDNPGSHWTKHDVLAGDVLDVSWNYSMKHKTRRWKYFMTRTDWNPNLPLSRAQFEDKPFFMVQLNEQP
HWSVDSEFALMPLDPTIHELILPQRSGYHVLLAVWEVANTGNAFYHVIDLDFVGEGGSDQPLPPANLRATNITKDSVSLA
WNASVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLLVETLAENSDNAPPSAPKSLH
SMNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLAPQYTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVHSVTTH
AKSGGGGDGGGDGGNGSIHPAWELGATYNAGDKVNNLGRDWVCLAFHIAHEPTWAPGDTDYHTLWTLIP

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 51496; Mature: 51496

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKYRTPNIISRNKSNGISSFHGHVFSPASRAYFAWLAGEIDEGALNQRESGKFFPETAD
CCCCCCCCHHCCCCCCCCCHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
NLPDPSAADDQPNSLPPLDGKIASAGESTGQMLDNPGSHWTKHDVLAGDVLDVSWNYSMK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCEEEEEECCCHH
HKTRRWKYFMTRTDWNPNLPLSRAQFEDKPFFMVQLNEQPHWSVDSEFALMPLDPTIHEL
CCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCHHHH
ILPQRSGYHVLLAVWEVANTGNAFYHVIDLDFVGEGGSDQPLPPANLRATNITKDSVSLA
HCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEE
WNASVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLL
ECCCHHHHEEEEEEECCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHCCCCHH
VETLAENSDNAPPSAPKSLHSMNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLAP
HHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHCC
QYTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVHSVTTHAKSGGGGDGGGDGGNGSIHP
CCCHHHCCCCCCCEEEEEEEECCCCCCEECCCCCHHHEEECCCCCCCCCCCCCCCCCCCC
AWELGATYNAGDKVNNLGRDWVCLAFHIAHEPTWAPGDTDYHTLWTLIP
CEECCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MMKYRTPNIISRNKSNGISSFHGHVFSPASRAYFAWLAGEIDEGALNQRESGKFFPETAD
CCCCCCCCHHCCCCCCCCCHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
NLPDPSAADDQPNSLPPLDGKIASAGESTGQMLDNPGSHWTKHDVLAGDVLDVSWNYSMK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCEEEEEECCCHH
HKTRRWKYFMTRTDWNPNLPLSRAQFEDKPFFMVQLNEQPHWSVDSEFALMPLDPTIHEL
CCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCHHHH
ILPQRSGYHVLLAVWEVANTGNAFYHVIDLDFVGEGGSDQPLPPANLRATNITKDSVSLA
HCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEE
WNASVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLL
ECCCHHHHEEEEEEECCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHCCCCHH
VETLAENSDNAPPSAPKSLHSMNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLAP
HHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHCC
QYTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVHSVTTHAKSGGGGDGGGDGGNGSIHP
CCCHHHCCCCCCCEEEEEEEECCCCCCEECCCCCHHHEEECCCCCCCCCCCCCCCCCCCC
AWELGATYNAGDKVNNLGRDWVCLAFHIAHEPTWAPGDTDYHTLWTLIP
CEECCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]