Click here to switch to the map view.

The map label for this gene is 51597660

Identifier: 51597660

GI number: 51597660

Start: 3992818

End: 3993921

Strand: Reverse

Name: 51597660

Synonym: YPTB3361

Alternate gene names: NA

Gene position: 3993921-3992818 (Counterclockwise)

Preceding gene: 51597661

Following gene: 51597650

Centisome position: 84.18

GC content: 49.18

Gene sequence:

>1104_bases
ATGAAAAAAAATATATTCCTCACGTTACGCAGTGAGAGGTATAAGGCGGGACTGCTGTTGTTGCTACTCCTGTTATGTAC
CACCAGTAAACCGAGTTTTGCCGCACTGCAAGTTAACTCTTGTTCTCTTGCTGTATCGGGGGCCGGAGGGGAAACACCGT
TTGTCATAAAAGCACTGCCAGTCACGTTGACGAATGGTTTTGTCTTGGGGAGCATGAACTTCAGTGTCGTCACGACATTC
ACAAAAACAGGGACGACAGCAGATTATTTATACCTCGGTGGTTGGTCGATGCTTGCTGGGGGGGCGGTTATGCCTGTTTC
TACCGGTGTTCCAGGGGTGAAGATGTCGGTGAATGTCAGTGACGCTTTATTCGGGGGATATGAATGGGGGAATACAGAGA
AGGCAACTCAGTCCTTGTTTGTACCAGGGACAAAAATAACGATTGCTAATCGAGTCACGGTCCAACTCATTGTGACTGAT
GCCAGTATTTATCAAGGGGGAGTGATTCATTGGTTTAATGTGGCGAGAAGTTTTGCGTTAGTTTCAGGTAATGCTCAGGT
CTGGACGACGAGAAGTGTTGCTACTGGTAGCTCACGTTGTGGTGATTTGTTGACGTTTAATATCGGGGCAACCGATATCG
TATTGCCACCTCCCACCGTGGCGACGTGTGATCTGGGGGCGACCGATATTGTGGTTGCACTGGATCCGGTTGATACCTCT
TCCCTACAAACGCAAGGTGACCGGGTGGGCGGACAAGCTTTTTCGATCCCACTGGGCAGTTGCGCTAAAGACGCTAAACC
TTATATCACGTTTACCGACAGTAGTAACAAGGCTAACCGTACCAATATACTGAGTTTATCACCGAGCAGCACGGCGACCG
GTGTGGGCCTTGTGCTTGAAAAAAGTGACGGCAATCTGGTGACATTTGGCGCAGAAAACGCCAGTGTCAGCGCCAGTAAT
GCGGGGCAATTTTTGATTGGTACCTCAACTGCCGCAGGAGGGAGCATGCCTTTAAATCTAACCGCTCGCTATATTCGCGC
TGAAGGGGTGTTAAAGAGCGGTAATGTGAAAGCGGATGCAATCTTTACCGTCGCCTACCCTTAA

Upstream 100 bases:

>100_bases
TAACGATTATGGTGGCCGACCAGAACTGAGTTTCAGTTGCAGCGGCAGCACTTGCCGGGCAGCTAAAGCGATTTAAACCG
GTTGAAAGAGAGAACCATCA

Downstream 100 bases:

>100_bases
GTGGCATACCATGTTAGCGGTCAGTAAAAAGCGACCAATAAGTGTCGCTTCAGACTGCTGGCAAAGTCAATTGAAGGGGA
AACGTGCCGTTGGGGTCGTA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKKNIFLTLRSERYKAGLLLLLLLLCTTSKPSFAALQVNSCSLAVSGAGGETPFVIKALPVTLTNGFVLGSMNFSVVTTF
TKTGTTADYLYLGGWSMLAGGAVMPVSTGVPGVKMSVNVSDALFGGYEWGNTEKATQSLFVPGTKITIANRVTVQLIVTD
ASIYQGGVIHWFNVARSFALVSGNAQVWTTRSVATGSSRCGDLLTFNIGATDIVLPPPTVATCDLGATDIVVALDPVDTS
SLQTQGDRVGGQAFSIPLGSCAKDAKPYITFTDSSNKANRTNILSLSPSSTATGVGLVLEKSDGNLVTFGAENASVSASN
AGQFLIGTSTAAGGSMPLNLTARYIRAEGVLKSGNVKADAIFTVAYP

Sequences:

>Translated_367_residues
MKKNIFLTLRSERYKAGLLLLLLLLCTTSKPSFAALQVNSCSLAVSGAGGETPFVIKALPVTLTNGFVLGSMNFSVVTTF
TKTGTTADYLYLGGWSMLAGGAVMPVSTGVPGVKMSVNVSDALFGGYEWGNTEKATQSLFVPGTKITIANRVTVQLIVTD
ASIYQGGVIHWFNVARSFALVSGNAQVWTTRSVATGSSRCGDLLTFNIGATDIVLPPPTVATCDLGATDIVVALDPVDTS
SLQTQGDRVGGQAFSIPLGSCAKDAKPYITFTDSSNKANRTNILSLSPSSTATGVGLVLEKSDGNLVTFGAENASVSASN
AGQFLIGTSTAAGGSMPLNLTARYIRAEGVLKSGNVKADAIFTVAYP
>Mature_367_residues
MKKNIFLTLRSERYKAGLLLLLLLLCTTSKPSFAALQVNSCSLAVSGAGGETPFVIKALPVTLTNGFVLGSMNFSVVTTF
TKTGTTADYLYLGGWSMLAGGAVMPVSTGVPGVKMSVNVSDALFGGYEWGNTEKATQSLFVPGTKITIANRVTVQLIVTD
ASIYQGGVIHWFNVARSFALVSGNAQVWTTRSVATGSSRCGDLLTFNIGATDIVLPPPTVATCDLGATDIVVALDPVDTS
SLQTQGDRVGGQAFSIPLGSCAKDAKPYITFTDSSNKANRTNILSLSPSSTATGVGLVLEKSDGNLVTFGAENASVSASN
AGQFLIGTSTAAGGSMPLNLTARYIRAEGVLKSGNVKADAIFTVAYP

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37983; Mature: 37983

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIFLTLRSERYKAGLLLLLLLLCTTSKPSFAALQVNSCSLAVSGAGGETPFVIKALP
CCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEE
VTLTNGFVLGSMNFSVVTTFTKTGTTADYLYLGGWSMLAGGAVMPVSTGVPGVKMSVNVS
EEEECCEEEECCCEEEEEEEECCCCCEEEEEECCHHHHCCCEEEEECCCCCCEEEEEECH
DALFGGYEWGNTEKATQSLFVPGTKITIANRVTVQLIVTDASIYQGGVIHWFNVARSFAL
HHEECCCCCCCCCHHHHEEECCCCEEEEECCEEEEEEEEECHHHCCCEEEEEHHHCEEEE
VSGNAQVWTTRSVATGSSRCGDLLTFNIGATDIVLPPPTVATCDLGATDIVVALDPVDTS
EECCCEEEEEEEECCCCCCCCCEEEEECCCEEEEECCCCEEEECCCCCEEEEEECCCCCC
SLQTQGDRVGGQAFSIPLGSCAKDAKPYITFTDSSNKANRTNILSLSPSSTATGVGLVLE
CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEE
KSDGNLVTFGAENASVSASNAGQFLIGTSTAAGGSMPLNLTARYIRAEGVLKSGNVKADA
CCCCCEEEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEEEEEEEECCEEECCCEEEEE
IFTVAYP
EEEEECC
>Mature Secondary Structure
MKKNIFLTLRSERYKAGLLLLLLLLCTTSKPSFAALQVNSCSLAVSGAGGETPFVIKALP
CCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEE
VTLTNGFVLGSMNFSVVTTFTKTGTTADYLYLGGWSMLAGGAVMPVSTGVPGVKMSVNVS
EEEECCEEEECCCEEEEEEEECCCCCEEEEEECCHHHHCCCEEEEECCCCCCEEEEEECH
DALFGGYEWGNTEKATQSLFVPGTKITIANRVTVQLIVTDASIYQGGVIHWFNVARSFAL
HHEECCCCCCCCCHHHHEEECCCCEEEEECCEEEEEEEEECHHHCCCEEEEEHHHCEEEE
VSGNAQVWTTRSVATGSSRCGDLLTFNIGATDIVLPPPTVATCDLGATDIVVALDPVDTS
EECCCEEEEEEEECCCCCCCCCEEEEECCCEEEEECCCCEEEECCCCCEEEEEECCCCCC
SLQTQGDRVGGQAFSIPLGSCAKDAKPYITFTDSSNKANRTNILSLSPSSTATGVGLVLE
CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEE
KSDGNLVTFGAENASVSASNAGQFLIGTSTAAGGSMPLNLTARYIRAEGVLKSGNVKADA
CCCCCEEEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEEEEEEEECCEEECCCEEEEE
IFTVAYP
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA