| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is flgJ
Identifier: 51597632
GI number: 51597632
Start: 3966598
End: 3966891
Strand: Reverse
Name: flgJ
Synonym: YPTB3332
Alternate gene names: NA
Gene position: 3966891-3966598 (Counterclockwise)
Preceding gene: 51597633
Following gene: 51597631
Centisome position: 83.61
GC content: 49.66
Gene sequence:
>294_bases ATGATTGAAGCCATTAATAAATCATCCCCGGTGATACCGGGGAGTTTTGTCGGTGACCTCCAGCCGCAAGATTTGGAACA AGCCGCGGTGCAGTTTGAAGCGGTATTTATGCGCACGTTATTGCAACAGATGCGCAAAGCCGCCGAGGTGCTGGCCGCCG ATGATGACCCGTTTAACAGTAAACAACAGCGCATGATGCGTGATTTTTACGATGACAAACTGGCCTCCACGTTGGCATCA CAGCGCAGCAGTGGCATTGCTAATTTGTTGATCCAGCAGTTGAGCAGTAAATAA
Upstream 100 bases:
>100_bases TAGCTTGGGTGCCTCTCCTGATGACATCATGGCGATATTACAAGCACTGTATGAAGCCGGTGCCTTGGACGCAGAATTAG TGGTTATTTAAGGACAACCT
Downstream 100 bases:
>100_bases CGGCTTATCAAACCGATTTAAGTTTGGCGATCAATTGCCCGCTTATAGGGAGTAAAGCGTATTTGCTATTTATTCAACAT CTGTTACTTATTCAACAAAT
Product: peptidoglycan hydrolase
Products: NA
Alternate protein names: Lateral Flagellar Peptidoglycan Hydrolase; Peptidoglycan Hydrolase; Flagellar Protein; Lytic Transglycosylase Catalytic; Flagellar Biosynthesis
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MIEAINKSSPVIPGSFVGDLQPQDLEQAAVQFEAVFMRTLLQQMRKAAEVLAADDDPFNSKQQRMMRDFYDDKLASTLAS QRSSGIANLLIQQLSSK
Sequences:
>Translated_97_residues MIEAINKSSPVIPGSFVGDLQPQDLEQAAVQFEAVFMRTLLQQMRKAAEVLAADDDPFNSKQQRMMRDFYDDKLASTLAS QRSSGIANLLIQQLSSK >Mature_97_residues MIEAINKSSPVIPGSFVGDLQPQDLEQAAVQFEAVFMRTLLQQMRKAAEVLAADDDPFNSKQQRMMRDFYDDKLASTLAS QRSSGIANLLIQQLSSK
Specific function: Unknown
COG id: COG3951
COG function: function code MNO; Rod binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.-
Molecular weight: Translated: 10791; Mature: 10791
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEAINKSSPVIPGSFVGDLQPQDLEQAAVQFEAVFMRTLLQQMRKAAEVLAADDDPFNS CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH KQQRMMRDFYDDKLASTLASQRSSGIANLLIQQLSSK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MIEAINKSSPVIPGSFVGDLQPQDLEQAAVQFEAVFMRTLLQQMRKAAEVLAADDDPFNS CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH KQQRMMRDFYDDKLASTLASQRSSGIANLLIQQLSSK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA