| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597628
Identifier: 51597628
GI number: 51597628
Start: 3962554
End: 3963000
Strand: Direct
Name: 51597628
Synonym: YPTB3328
Alternate gene names: NA
Gene position: 3962554-3963000 (Clockwise)
Preceding gene: 51597627
Following gene: 161760560
Centisome position: 83.52
GC content: 42.95
Gene sequence:
>447_bases ATGAAATGGTTAACTGCTAGCAATGGAATACTACTGTCAATTTTAGGGTTATTCCTTTCACTGGCAGCACTGGCCTCTTC TGAAGGAAAGAAAAAGCCCACTCTTGCCGAGGCTCAATTACAAATGGGTTTTTATGATTTACTGTCACAGCAGAAAGAGA TCTATGACGCCCGTGTTACCGCGACCCAAGGTGGTGTTATTAGCACCATTACCAGCCCTAATGATAATCGTTTTATTTTT AAGGGTAAGTTTACTGAACAAACCACCCAAAATGGTCAGTTGAGTTTCAGTTACAGCCCCATCTTTTTCAATAACCCCAC GTCTGGCCGCATGATTGAGGGGTTTCTGGATTATTTAATGCACAATACCGTGTTTATGACGCCAATGGTGGTTGAAGGGC AACCTTTATTGGTGGGGCAAAGCGGTATTGTCTTGGGCGAGAAATAA
Upstream 100 bases:
>100_bases CAATGCGAGAATAAACAGTTAGGGATGACCATTTACCATTGGCGTCAGAACTCTCAGTTATTAAATAATTTGATTTACCG TGAAATGGAGAGAAAAATAA
Downstream 100 bases:
>100_bases CTGGGCGTGAGAAATAGCTGGGGCTGAAAAAACGGCTGACATGTGCGATCAACGCACATGCAGCTTGAAGAATAACGGGT AATGTTTACCTTGCTGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKWLTASNGILLSILGLFLSLAALASSEGKKKPTLAEAQLQMGFYDLLSQQKEIYDARVTATQGGVISTITSPNDNRFIF KGKFTEQTTQNGQLSFSYSPIFFNNPTSGRMIEGFLDYLMHNTVFMTPMVVEGQPLLVGQSGIVLGEK
Sequences:
>Translated_148_residues MKWLTASNGILLSILGLFLSLAALASSEGKKKPTLAEAQLQMGFYDLLSQQKEIYDARVTATQGGVISTITSPNDNRFIF KGKFTEQTTQNGQLSFSYSPIFFNNPTSGRMIEGFLDYLMHNTVFMTPMVVEGQPLLVGQSGIVLGEK >Mature_148_residues MKWLTASNGILLSILGLFLSLAALASSEGKKKPTLAEAQLQMGFYDLLSQQKEIYDARVTATQGGVISTITSPNDNRFIF KGKFTEQTTQNGQLSFSYSPIFFNNPTSGRMIEGFLDYLMHNTVFMTPMVVEGQPLLVGQSGIVLGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16236; Mature: 16236
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLTASNGILLSILGLFLSLAALASSEGKKKPTLAEAQLQMGFYDLLSQQKEIYDARVT CCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE ATQGGVISTITSPNDNRFIFKGKFTEQTTQNGQLSFSYSPIFFNNPTSGRMIEGFLDYLM ECCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHH HNTVFMTPMVVEGQPLLVGQSGIVLGEK CCEEEECEEEECCCEEEEECCCEEEECC >Mature Secondary Structure MKWLTASNGILLSILGLFLSLAALASSEGKKKPTLAEAQLQMGFYDLLSQQKEIYDARVT CCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE ATQGGVISTITSPNDNRFIFKGKFTEQTTQNGQLSFSYSPIFFNNPTSGRMIEGFLDYLM ECCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHH HNTVFMTPMVVEGQPLLVGQSGIVLGEK CCEEEECEEEECCCEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA