| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597616
Identifier: 51597616
GI number: 51597616
Start: 3952329
End: 3952802
Strand: Reverse
Name: 51597616
Synonym: YPTB3316
Alternate gene names: NA
Gene position: 3952802-3952329 (Counterclockwise)
Preceding gene: 51597617
Following gene: 51597615
Centisome position: 83.31
GC content: 38.61
Gene sequence:
>474_bases ATGATATACCAACTCACTAAAAAACAAGACGTTTTTTTGGATGGCGAGAAAGTCGATCTCAGTAATATCACTTTATGGCA GCGTCTTAAGTCTATTACCGGCGGTAAAATTACCACTAAAGATAGCCAAGAGGTTAAGTTCGCTTATGTTTTGGATTATG CCGGGAGTGAGTTTGCTGCTGTTCCTATTCAAGGTCTTAGACTTGAAGGTAATACTAATTACTTCTACAAAAAATTCACC AAAGAATATAAAATCTCGACGCCTAAACTTTTACACTATGGTTCAGACACGATAAAAAATATCACTCTGCATGGCAGAAG TAATGTGTCTTTCTTTATGGATAACGGTGGCCGAAATGCGCCAACGGCTGCGGCAAAATATAATAAAAACACCGGAGAAA TATCATTGATTAAATCGATGCATGAGCTCTCTAAATCAATGCAGGACATCAAGAACAGCGGCGCGAGAACATGA
Upstream 100 bases:
>100_bases AAAAACGAATATATTTTTTATTGTTGAGCGGCTTTATCCTCGAGACAGTTTAGCGCCGTCTGTAGGGACTGTCGGGCCTT CTTTGGTACAAGTACACCGG
Downstream 100 bases:
>100_bases TGCTTACCACGCCAAAATGGGGGCTACCTCTCCTTATCATCGTGTATGCGGCGATAGGGTTCGTGGTGCCGAACGCCTTG GTTGAGGTTTATTTTCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MIYQLTKKQDVFLDGEKVDLSNITLWQRLKSITGGKITTKDSQEVKFAYVLDYAGSEFAAVPIQGLRLEGNTNYFYKKFT KEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRNAPTAAAKYNKNTGEISLIKSMHELSKSMQDIKNSGART
Sequences:
>Translated_157_residues MIYQLTKKQDVFLDGEKVDLSNITLWQRLKSITGGKITTKDSQEVKFAYVLDYAGSEFAAVPIQGLRLEGNTNYFYKKFT KEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRNAPTAAAKYNKNTGEISLIKSMHELSKSMQDIKNSGART >Mature_157_residues MIYQLTKKQDVFLDGEKVDLSNITLWQRLKSITGGKITTKDSQEVKFAYVLDYAGSEFAAVPIQGLRLEGNTNYFYKKFT KEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRNAPTAAAKYNKNTGEISLIKSMHELSKSMQDIKNSGART
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17671; Mature: 17671
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYQLTKKQDVFLDGEKVDLSNITLWQRLKSITGGKITTKDSQEVKFAYVLDYAGSEFAA CCEECCCCCEEEECCCEECCCCHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCEEE VPIQGLRLEGNTNYFYKKFTKEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRNA ECEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCC PTAAAKYNKNTGEISLIKSMHELSKSMQDIKNSGART CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIYQLTKKQDVFLDGEKVDLSNITLWQRLKSITGGKITTKDSQEVKFAYVLDYAGSEFAA CCEECCCCCEEEECCCEECCCCHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCEEE VPIQGLRLEGNTNYFYKKFTKEYKISTPKLLHYGSDTIKNITLHGRSNVSFFMDNGGRNA ECEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCC PTAAAKYNKNTGEISLIKSMHELSKSMQDIKNSGART CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA