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The map label for this gene is slyB

Identifier: 51597613

GI number: 51597613

Start: 3950902

End: 3951369

Strand: Direct

Name: slyB

Synonym: YPTB3313

Alternate gene names: 51597613

Gene position: 3950902-3951369 (Clockwise)

Preceding gene: 51597612

Following gene: 51597627

Centisome position: 83.27

GC content: 57.48

Gene sequence:

>468_bases
ATGGTTAAACCATTTATTCTTGCTGCTATCGCCGTCGCCACGCTAAGTGGTTGTGCCAATAACAATACCCTTTCGGGCGA
TACCTTCAGCAGCTCTCAAGCTGGGCAAACCCAATCCGTTACACACGGTACCTTAGTGTCTGTCCGCCCTGTGACGATTC
AGGGGGGGGATGGGAATAATGTTGCCGGAGCCGTAGGGGGTGCCGTTGTCGGTGGTTTCTTAGGGAATACGATAGGGGGT
GGCACCGGGCGTCGCCTTGGCACCGCAGCAGGCGTGGTGGCGGGTGGGGTCGTTGGTCAGCAGGTCCAGAGCCTGATGAA
TCGCAGTAGCGGCGTTGAGCTAGAAGTGCGCCGTGATGATGGGTCAACATTCCTGGTCGTTCAAGCTCAAGGTGTGACAC
AGTTCCACCCAGGGCAGCGGGTGACGATTGCCACCAGTGGCAGTACCGTGACGATCACGCCACGTTAA

Upstream 100 bases:

>100_bases
ATAAATTTTGTATATGAATCAATCTATCTATAAATCAACCGTGTTATGCTCATCTGACCGGGCGATATTCAATCGGTTCT
GGGCTAAAAGGGGCTACACC

Downstream 100 bases:

>100_bases
ACCTTCGCATCACCCTTGGTATCTGTTTCTTCGCTGCCAAGGGTGGTTTCATCTTTGACGGTTAATGGAAATTTAACGGC
CAACACGCGGATGACGGATG

Product: outer membrane lipoprotein Pcp precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MVKPFILAAIAVATLSGCANNNTLSGDTFSSSQAGQTQSVTHGTLVSVRPVTIQGGDGNNVAGAVGGAVVGGFLGNTIGG
GTGRRLGTAAGVVAGGVVGQQVQSLMNRSSGVELEVRRDDGSTFLVVQAQGVTQFHPGQRVTIATSGSTVTITPR

Sequences:

>Translated_155_residues
MVKPFILAAIAVATLSGCANNNTLSGDTFSSSQAGQTQSVTHGTLVSVRPVTIQGGDGNNVAGAVGGAVVGGFLGNTIGG
GTGRRLGTAAGVVAGGVVGQQVQSLMNRSSGVELEVRRDDGSTFLVVQAQGVTQFHPGQRVTIATSGSTVTITPR
>Mature_155_residues
MVKPFILAAIAVATLSGCANNNTLSGDTFSSSQAGQTQSVTHGTLVSVRPVTIQGGDGNNVAGAVGGAVVGGFLGNTIGG
GTGRRLGTAAGVVAGGVVGQQVQSLMNRSSGVELEVRRDDGSTFLVVQAQGVTQFHPGQRVTIATSGSTVTITPR

Specific function: Facilitates ferrioxamine uptake [H]

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=155, Percent_Identity=61.9354838709677, Blast_Score=175, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15351; Mature: 15351

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPFILAAIAVATLSGCANNNTLSGDTFSSSQAGQTQSVTHGTLVSVRPVTIQGGDGNN
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
VAGAVGGAVVGGFLGNTIGGGTGRRLGTAAGVVAGGVVGQQVQSLMNRSSGVELEVRRDD
CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECC
GSTFLVVQAQGVTQFHPGQRVTIATSGSTVTITPR
CCEEEEEEECCCEEECCCCEEEEEECCCEEEEECC
>Mature Secondary Structure
MVKPFILAAIAVATLSGCANNNTLSGDTFSSSQAGQTQSVTHGTLVSVRPVTIQGGDGNN
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
VAGAVGGAVVGGFLGNTIGGGTGRRLGTAAGVVAGGVVGQQVQSLMNRSSGVELEVRRDD
CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECC
GSTFLVVQAQGVTQFHPGQRVTIATSGSTVTITPR
CCEEEEEEECCCEEECCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732192 [H]