| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597594
Identifier: 51597594
GI number: 51597594
Start: 3895065
End: 3896192
Strand: Reverse
Name: 51597594
Synonym: YPTB3294
Alternate gene names: NA
Gene position: 3896192-3895065 (Counterclockwise)
Preceding gene: 51597595
Following gene: 51597593
Centisome position: 82.12
GC content: 49.65
Gene sequence:
>1128_bases ATGATCCAACCTCAGAAAATCGTGGTCTGCGGCACTTTATTTGGGCAGGTTTATCTCTCCGCCTTTAAGACGGCCTTTGA GGGGGGAGAACTGGCGGGCATTCTCGCACAAGGAAGTGAGCGTTCCAGGCAATTAGCACACGCCTATGGTGTCCCGCTAT ATCATCATGTTGATGAATTACCTGATGATATAAATATGGCTTGTGTGGTGATCCGCTCCACTATCGTGGGGGGGAAAGGC AGTGAAATCACGAAGGCGTTATTAAAACGGGGCATTTCAGTATTACAAGAGCATCCAGTTTGTCTTGAAGATGTGGCTGA GTGCCTGAGGTTGGCTCGTCAACAGGGCTGCCATTACCAGGTGAATACGCATTATCCCCATGTGCCCGCAGTACGCCAAT TTATCGCCTATTTGCACGAGGCCATGCAAACCCAAAAACCGTGTTTTATTGAGGCAACTTGCGGGGTTCAAGTCATTTGC GGGCTGCTGGATATCATCGGGCGTGTATTGGGGGGGCATTTTTCACCTTATGGTTTTAGCGTGGCAGGCGGTGACGTGTT ACTGCGTTCACTGCTGGAAAACCCTGCGCCATATACCCAGCTACAGGGTGTGATTGCGGGTGTCCCCCTTACCTTAAATT TGCAAAATCAGTTAGACCCAGCCGCTCCTGATAACCATTTTCATATCATGCACCGCCTGTGTGTGGGGTTACCTAGTGGC AATCTACTCTTGGTCAATACACATGGGCCGGTTATCTGGAGCCCCTATTTTCATATTCCGAGGGTGAGAACTCCTTTCGG CTGTCGTGAGGTTATCGACCCCGATGACGCTCCACACTATTTTTTGCCCCCCCTGAGTCAACTTTTTTCACAGGAAAGTG ACAATCTGTTAAGCGTCTTGCACCACCAGTGGCCCTCGGCGATACGTCATGCTCTGCGAGAATTTATCGAGCAACAGCAG CATTCGTCACCTGCTTATGCGCAATTCCTGCTCTCGCTAACACAAGTATGGAAAACACTTATGGAAAAAGTCGGCAATCC AGAAAGTGTGCATTTTGCCGAACCGATGATGGCGTCACCTAAGGTGGCGACATTTTTATCTCAATGGCAGGGAGAGCGTG ATGATTGA
Upstream 100 bases:
>100_bases AGGTATTGCTGTCACAACTTAATGAATTGGCTTTATTCAGTCATTTCCATATCCACTGTCAACTCGATAATAACGCAGTG AATTTTCAGGAGGGGGCATT
Downstream 100 bases:
>100_bases ACGCCTTTTTCGATTGATAAAACCGGGAACTCGTCAGCAAATGGTGTGTTTTCACCATGCAGGTGGTTCAGCGGAGTATT TTTTGCCGTGGAAAACGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Siderophore-Like Synthase Protein; Oxidoreductase; Pyochelin Biosynthetic Protein; Reductase Component; Siderophore Biosynthetic Protein; Thiazolinyl-S-HMWP1 Reductase YbtU; Thiazoline Reductase; Yersiniabactin Synthetase Thiazolinyl Reductase Component; Oxidoreductase Domain Protein; Oxidoreductase/Methylase; Pyochelin Biosynthetic Protein PchG; Polyketide Synthase
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MIQPQKIVVCGTLFGQVYLSAFKTAFEGGELAGILAQGSERSRQLAHAYGVPLYHHVDELPDDINMACVVIRSTIVGGKG SEITKALLKRGISVLQEHPVCLEDVAECLRLARQQGCHYQVNTHYPHVPAVRQFIAYLHEAMQTQKPCFIEATCGVQVIC GLLDIIGRVLGGHFSPYGFSVAGGDVLLRSLLENPAPYTQLQGVIAGVPLTLNLQNQLDPAAPDNHFHIMHRLCVGLPSG NLLLVNTHGPVIWSPYFHIPRVRTPFGCREVIDPDDAPHYFLPPLSQLFSQESDNLLSVLHHQWPSAIRHALREFIEQQQ HSSPAYAQFLLSLTQVWKTLMEKVGNPESVHFAEPMMASPKVATFLSQWQGERDD
Sequences:
>Translated_375_residues MIQPQKIVVCGTLFGQVYLSAFKTAFEGGELAGILAQGSERSRQLAHAYGVPLYHHVDELPDDINMACVVIRSTIVGGKG SEITKALLKRGISVLQEHPVCLEDVAECLRLARQQGCHYQVNTHYPHVPAVRQFIAYLHEAMQTQKPCFIEATCGVQVIC GLLDIIGRVLGGHFSPYGFSVAGGDVLLRSLLENPAPYTQLQGVIAGVPLTLNLQNQLDPAAPDNHFHIMHRLCVGLPSG NLLLVNTHGPVIWSPYFHIPRVRTPFGCREVIDPDDAPHYFLPPLSQLFSQESDNLLSVLHHQWPSAIRHALREFIEQQQ HSSPAYAQFLLSLTQVWKTLMEKVGNPESVHFAEPMMASPKVATFLSQWQGERDD >Mature_375_residues MIQPQKIVVCGTLFGQVYLSAFKTAFEGGELAGILAQGSERSRQLAHAYGVPLYHHVDELPDDINMACVVIRSTIVGGKG SEITKALLKRGISVLQEHPVCLEDVAECLRLARQQGCHYQVNTHYPHVPAVRQFIAYLHEAMQTQKPCFIEATCGVQVIC GLLDIIGRVLGGHFSPYGFSVAGGDVLLRSLLENPAPYTQLQGVIAGVPLTLNLQNQLDPAAPDNHFHIMHRLCVGLPSG NLLLVNTHGPVIWSPYFHIPRVRTPFGCREVIDPDDAPHYFLPPLSQLFSQESDNLLSVLHHQWPSAIRHALREFIEQQQ HSSPAYAQFLLSLTQVWKTLMEKVGNPESVHFAEPMMASPKVATFLSQWQGERDD
Specific function: Unknown
COG id: COG4693
COG function: function code Q; Oxidoreductase (NAD-binding), involved in siderophore biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41595; Mature: 41595
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQPQKIVVCGTLFGQVYLSAFKTAFEGGELAGILAQGSERSRQLAHAYGVPLYHHVDEL CCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHHCCCHHHHHHHC PDDINMACVVIRSTIVGGKGSEITKALLKRGISVLQEHPVCLEDVAECLRLARQQGCHYQ CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE VNTHYPHVPAVRQFIAYLHEAMQTQKPCFIEATCGVQVICGLLDIIGRVLGGHFSPYGFS ECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCE VAGGDVLLRSLLENPAPYTQLQGVIAGVPLTLNLQNQLDPAAPDNHFHIMHRLCVGLPSG ECCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCC NLLLVNTHGPVIWSPYFHIPRVRTPFGCREVIDPDDAPHYFLPPLSQLFSQESDNLLSVL CEEEEECCCCEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH HHQWPSAIRHALREFIEQQQHSSPAYAQFLLSLTQVWKTLMEKVGNPESVHFAEPMMASP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC KVATFLSQWQGERDD HHHHHHHHHCCCCCC >Mature Secondary Structure MIQPQKIVVCGTLFGQVYLSAFKTAFEGGELAGILAQGSERSRQLAHAYGVPLYHHVDEL CCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHHCCCHHHHHHHC PDDINMACVVIRSTIVGGKGSEITKALLKRGISVLQEHPVCLEDVAECLRLARQQGCHYQ CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE VNTHYPHVPAVRQFIAYLHEAMQTQKPCFIEATCGVQVICGLLDIIGRVLGGHFSPYGFS ECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCE VAGGDVLLRSLLENPAPYTQLQGVIAGVPLTLNLQNQLDPAAPDNHFHIMHRLCVGLPSG ECCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCC NLLLVNTHGPVIWSPYFHIPRVRTPFGCREVIDPDDAPHYFLPPLSQLFSQESDNLLSVL CEEEEECCCCEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH HHQWPSAIRHALREFIEQQQHSSPAYAQFLLSLTQVWKTLMEKVGNPESVHFAEPMMASP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC KVATFLSQWQGERDD HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA