| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597576
Identifier: 51597576
GI number: 51597576
Start: 3859378
End: 3859902
Strand: Reverse
Name: 51597576
Synonym: YPTB3274
Alternate gene names: NA
Gene position: 3859902-3859378 (Counterclockwise)
Preceding gene: 51597577
Following gene: 51597575
Centisome position: 81.35
GC content: 31.62
Gene sequence:
>525_bases ATGATGAATATTTATAGGCAGAAATTAGATGAAGAAATTTTAGCTTTAGATAATGTTGAGAGTTTAAGTGTTATTTTTAA TGCTTTTAAACAATACTGTGGCGACTTGGTTGCTACCAGAACGGGTATATCAATAAAAGGGGTTGATGGAGCACCTGATT GGTATGGATATGAACGTGTGATTTGGGACTCAAGTTATGTGTTACTAGAACCTATTTTAAAAAAATATTGTGGAGAAAAT GCCCTTCTCGATGGTATCTCTTCAATGTGTACTGAAAAAAAACATGGTAAAGGGCGTCAGTCTTTTGTGATGTTATTAGA TAAGTATGGTAGTACAAAATATTTACCTATTTTAGCTAAGCTGATAGATGATCCAGAGGTTGCTATTCATTCAATTGAAG CATTAACAAAACTGAAAGATCTCTCTCAATTTGAAAAAATAAAAAAACTATCAGAATGTACCAAAAGCACTCCAATAAGG AGCTATGCAAGAAGATATATAAAAAAACTTAGTAACAATAAATAG
Upstream 100 bases:
>100_bases CTTATTCTATGACTTGGCGCGCTAAATAACTGAATTTTTATTAAGGGGGTGATTTACATGCGGGAAGCCCTTTAAATATA ATTATGACTGATTTAAATAA
Downstream 100 bases:
>100_bases ATGTATATTTAACAACCCACTTAATATTTTAGAGGAGTTGAAAGTTAGGGGTTATGGTGGTATTAGCCGGGAAGGTGGCC CTCTTGCCAATAAGCGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MMNIYRQKLDEEILALDNVESLSVIFNAFKQYCGDLVATRTGISIKGVDGAPDWYGYERVIWDSSYVLLEPILKKYCGEN ALLDGISSMCTEKKHGKGRQSFVMLLDKYGSTKYLPILAKLIDDPEVAIHSIEALTKLKDLSQFEKIKKLSECTKSTPIR SYARRYIKKLSNNK
Sequences:
>Translated_174_residues MMNIYRQKLDEEILALDNVESLSVIFNAFKQYCGDLVATRTGISIKGVDGAPDWYGYERVIWDSSYVLLEPILKKYCGEN ALLDGISSMCTEKKHGKGRQSFVMLLDKYGSTKYLPILAKLIDDPEVAIHSIEALTKLKDLSQFEKIKKLSECTKSTPIR SYARRYIKKLSNNK >Mature_174_residues MMNIYRQKLDEEILALDNVESLSVIFNAFKQYCGDLVATRTGISIKGVDGAPDWYGYERVIWDSSYVLLEPILKKYCGEN ALLDGISSMCTEKKHGKGRQSFVMLLDKYGSTKYLPILAKLIDDPEVAIHSIEALTKLKDLSQFEKIKKLSECTKSTPIR SYARRYIKKLSNNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19826; Mature: 19826
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNIYRQKLDEEILALDNVESLSVIFNAFKQYCGDLVATRTGISIKGVDGAPDWYGYERV CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHH IWDSSYVLLEPILKKYCGENALLDGISSMCTEKKHGKGRQSFVMLLDKYGSTKYLPILAK HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH LIDDPEVAIHSIEALTKLKDLSQFEKIKKLSECTKSTPIRSYARRYIKKLSNNK HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MMNIYRQKLDEEILALDNVESLSVIFNAFKQYCGDLVATRTGISIKGVDGAPDWYGYERV CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHH IWDSSYVLLEPILKKYCGENALLDGISSMCTEKKHGKGRQSFVMLLDKYGSTKYLPILAK HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH LIDDPEVAIHSIEALTKLKDLSQFEKIKKLSECTKSTPIRSYARRYIKKLSNNK HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA