| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597467
Identifier: 51597467
GI number: 51597467
Start: 3711593
End: 3712216
Strand: Direct
Name: 51597467
Synonym: YPTB3156
Alternate gene names: NA
Gene position: 3711593-3712216 (Clockwise)
Preceding gene: 51597466
Following gene: 51597468
Centisome position: 78.23
GC content: 46.31
Gene sequence:
>624_bases ATGGATAAGTTGCCGAAAATCACATTGCCGGCGTGGATGAACAAGGGCGAACCCGTCAAGTTAATGCGCGCTTGCCTGGC ATTTTGGCAAAAAGTTTACACCTGGTTAAAGTGGCCGCTTAATCAAACCGATCCGCTTCTTTGCGTTGTGCCGCTGCTCA ATGTTCTTGCGTATCAGCGCGATGTCGCGCGGTTCCCCGATGAGCCGCTGTCACTGTTTCGTAAGCGAGTAAATTACGCG TTTATTAACGCCAGGGATGCCGGCTCGCTGGCGGGGTTTGCGGCAATATTTGAGCGCCTCGGCATCGGCGTTATTACGCA ACATGAGCGACAGCCAGGTTACGACTGGGACATTATTTTAATTCGCGTTAATGATGTTCAACTTTCAGAAAATAATAATT TAATGATGGCATTAGTTCGGCAATATGGGCGCACATGCCGCCGTTATATATTTCAGGTTGTCAACGCTACGACATTGAAT ATACACGGTGGAATGTTTGGCGGTGATTATTATTATCATCATGCACAATTAAATATTGTACCGGGTCTGATGCCAGGAAA CATTATGTTAACGCCTGCACAAATGCAGCACACACACGCAGTATATTCGGCAAAATTAGATTAA
Upstream 100 bases:
>100_bases GCGAATTTTGCTGAAATTGAGTCACTGACATTTTCCCAGGGCGACATTGTCAGTGGGCTATCTGTCCCCCGCCTGGGCGT ACTAACACTGGAGAAAGCGA
Downstream 100 bases:
>100_bases GGATTATTTATGGCTACGGTAATTACCCGTGCTTTTGAAAACTGGCAGGCGCAACAAACATTAAATAACTTACCTGCCCG TCCGGACACTGTTATTTTTG
Product: bacteriophage protein.
Products: NA
Alternate protein names: Phage-Like Protein; Bacteriophage Protein; Hemolysins-Like Protein Containing CBS Domains
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQRDVARFPDEPLSLFRKRVNYA FINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIILIRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLN IHGGMFGGDYYYHHAQLNIVPGLMPGNIMLTPAQMQHTHAVYSAKLD
Sequences:
>Translated_207_residues MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQRDVARFPDEPLSLFRKRVNYA FINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIILIRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLN IHGGMFGGDYYYHHAQLNIVPGLMPGNIMLTPAQMQHTHAVYSAKLD >Mature_207_residues MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQRDVARFPDEPLSLFRKRVNYA FINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIILIRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLN IHGGMFGGDYYYHHAQLNIVPGLMPGNIMLTPAQMQHTHAVYSAKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23751; Mature: 23751
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQR CCCCCCEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHH DVARFPDEPLSLFRKRVNYAFINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIIL HHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEE IRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLNIHGGMFGGDYYYHHAQLNIV EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEEE PGLMPGNIMLTPAQMQHTHAVYSAKLD CCCCCCCEEEECHHHHHHHHHHEECCC >Mature Secondary Structure MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQR CCCCCCEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHH DVARFPDEPLSLFRKRVNYAFINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIIL HHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEE IRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLNIHGGMFGGDYYYHHAQLNIV EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEEE PGLMPGNIMLTPAQMQHTHAVYSAKLD CCCCCCCEEEECHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA