| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51597460
Identifier: 51597460
GI number: 51597460
Start: 3706487
End: 3706789
Strand: Direct
Name: 51597460
Synonym: YPTB3149
Alternate gene names: NA
Gene position: 3706487-3706789 (Clockwise)
Preceding gene: 51597459
Following gene: 51597461
Centisome position: 78.12
GC content: 52.15
Gene sequence:
>303_bases ATGCCAAACGGAGAAACCACACTTATCACCCGGTTGTTATTGATTGCAACAATCGGGGCCACTATCGCCCTGGGGAAGTT ATTGGCCGGCAGTGAGCAAATCACATTACGCCTGGCGCTCGGGCGCATTATTTTGGGTACCGCCGTTTCATTGCTGGCCG GCGCGGCGCTCATTCACTTGCCAGAAATTGGTGAGCTGGAATTGATCGCTATCGCGTCCGGGCTGGGAATTGCGGGGCAT ACCGCCGTTGAGTTGATATTAAAACGCTATCTGGGCGGGCATAAAAAAGGAAATGAATTATGA
Upstream 100 bases:
>100_bases AATTAAATTTATCGTGACCAGCCCGGATTTTGTCCACATCGACGGTGTGCCAATTTTATCTGAGAGTGATGTTCGCGAAC TGATTGGATGAGTTATACAT
Downstream 100 bases:
>100_bases CGTTAAGCGAAAAACAACAGCTATTTGCTCAGTTGATCGCGCAGTTGATTGTGTGGGCTGGCGACAACGGATATCGCTTG ACGTTTGGCGAAGCTTACCG
Product: phage P2 holin-like protein
Products: NA
Alternate protein names: Holin Bacteriophage Origin; Phage Holin
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MPNGETTLITRLLLIATIGATIALGKLLAGSEQITLRLALGRIILGTAVSLLAGAALIHLPEIGELELIAIASGLGIAGH TAVELILKRYLGGHKKGNEL
Sequences:
>Translated_100_residues MPNGETTLITRLLLIATIGATIALGKLLAGSEQITLRLALGRIILGTAVSLLAGAALIHLPEIGELELIAIASGLGIAGH TAVELILKRYLGGHKKGNEL >Mature_99_residues PNGETTLITRLLLIATIGATIALGKLLAGSEQITLRLALGRIILGTAVSLLAGAALIHLPEIGELELIAIASGLGIAGHT AVELILKRYLGGHKKGNEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10268; Mature: 10136
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNGETTLITRLLLIATIGATIALGKLLAGSEQITLRLALGRIILGTAVSLLAGAALIHL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCC PEIGELELIAIASGLGIAGHTAVELILKRYLGGHKKGNEL CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PNGETTLITRLLLIATIGATIALGKLLAGSEQITLRLALGRIILGTAVSLLAGAALIHL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCC PEIGELELIAIASGLGIAGHTAVELILKRYLGGHKKGNEL CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA