| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597455
Identifier: 51597455
GI number: 51597455
Start: 3703209
End: 3703682
Strand: Direct
Name: 51597455
Synonym: YPTB3144
Alternate gene names: NA
Gene position: 3703209-3703682 (Clockwise)
Preceding gene: 51597454
Following gene: 51597456
Centisome position: 78.05
GC content: 53.8
Gene sequence:
>474_bases GTGGCAGCACCATCATTAGGGTTTAGCGGTCGGCAGATTGAATACCAGAACGCACCCATTGTTAACGGTGTGACATTTTG GCCTGACCTCAATCTTGCCGACTTTCAAAAGTCGCGCACTATCCCGCCAGAGCTGCCGGCATCAACTGCCGCGCAGGCGT TATTAGCCGCGATTGCTGAAATTAATGATGATGTTGCCGACGTCGTGGCCTATTGGCAAGGCAAAGGCCACGCCACTGCA CTGGATACGCCAGGGGCAAAAATGGCTGATGAAAATCAGCTTACCGCTCAATACAAAAAGGCGGTCTACGCCAGGGCAAA AGCGGATTTACTTGGTGAGTTTGCCAGTATTGGCCGGCGCGAAACGCACCCAGGGCAAGAGAGCAGCGAAACCCGCGCCA TTTTGCTGGCGGAAGCGGCGTTTGTGCTTCGCAATATGAAGAAATTTCCGCGCGCGGGGGTGCATTTGATATGA
Upstream 100 bases:
>100_bases GCAAGCCGGGGCGGGCGCGAGGGAGACAGAAAACCCGTAAGGTTTTCAAGGTCGTGGATCTCGGTCAGCCCGCTTCCCAT TTTGCAAATAAGGGGTTCAC
Downstream 100 bases:
>100_bases GTCAGATAGAGAGCCTTACCGCATTTTTAACTGAGTACTTGCCCGAGCGGGCTATGCAACAATTTGAAAGTGCTATTGAT AACGCGGAACTGATTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Head Completion Protein; Head Completion/Stabilization Protein; Head Completion/Stabilization Protein Bacteriophage Origin; Prophage; Phage Gene
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAAPSLGFSGRQIEYQNAPIVNGVTFWPDLNLADFQKSRTIPPELPASTAAQALLAAIAEINDDVADVVAYWQGKGHATA LDTPGAKMADENQLTAQYKKAVYARAKADLLGEFASIGRRETHPGQESSETRAILLAEAAFVLRNMKKFPRAGVHLI
Sequences:
>Translated_157_residues MAAPSLGFSGRQIEYQNAPIVNGVTFWPDLNLADFQKSRTIPPELPASTAAQALLAAIAEINDDVADVVAYWQGKGHATA LDTPGAKMADENQLTAQYKKAVYARAKADLLGEFASIGRRETHPGQESSETRAILLAEAAFVLRNMKKFPRAGVHLI >Mature_156_residues AAPSLGFSGRQIEYQNAPIVNGVTFWPDLNLADFQKSRTIPPELPASTAAQALLAAIAEINDDVADVVAYWQGKGHATAL DTPGAKMADENQLTAQYKKAVYARAKADLLGEFASIGRRETHPGQESSETRAILLAEAAFVLRNMKKFPRAGVHLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16934; Mature: 16803
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPSLGFSGRQIEYQNAPIVNGVTFWPDLNLADFQKSRTIPPELPASTAAQALLAAIAE CCCCCCCCCCCEEEECCCCEECCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH INDDVADVVAYWQGKGHATALDTPGAKMADENQLTAQYKKAVYARAKADLLGEFASIGRR HCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ETHPGQESSETRAILLAEAAFVLRNMKKFPRAGVHLI CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AAPSLGFSGRQIEYQNAPIVNGVTFWPDLNLADFQKSRTIPPELPASTAAQALLAAIAE CCCCCCCCCCEEEECCCCEECCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH INDDVADVVAYWQGKGHATALDTPGAKMADENQLTAQYKKAVYARAKADLLGEFASIGRR HCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ETHPGQESSETRAILLAEAAFVLRNMKKFPRAGVHLI CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA