| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597446
Identifier: 51597446
GI number: 51597446
Start: 3692337
End: 3693002
Strand: Direct
Name: 51597446
Synonym: YPTB3135
Alternate gene names: NA
Gene position: 3692337-3693002 (Clockwise)
Preceding gene: 51597445
Following gene: 51597447
Centisome position: 77.82
GC content: 39.64
Gene sequence:
>666_bases ATGGCTACTCATATTAATACTGCCAATGCAATTGAAGGGCTGACTTGTGCTATTGATACCTTTAAATATATTGAGCAATA TTTAAACTTTAAAATGAAACACCCCATTCAGTATTTAACGAATACCATAACTGAAATAGAGCGACTTAATGATGAAGCAA TCAGGTTAAGGAAGCGTATTAAGTTTTTAGAGGAATTCAATTCCTCATTCGAATCTCAATGGGATGATTTGATTTTTGCG GTTATGGGTACCGAAGCCGGTAAACGTATCTGTGCTGAAGGGGCTGATGAAACAACAATAAGGGCAGTCAGCGCTATCCG TAAAACAGAGTTTGACAGAAAAGAAGCCCTGTGCGTAGCCCAGGCATTTCAAGAGACAGCACAATCTCCCATTCCTGCGC CAGCACCAAAAACACATCGTTTGAAAATCTTGCCTGAATATTTTCAGTCAGTTATTGAAGGTAGAAAAAAAGCGGAACTG AGAGTAAATGACCGTGATTTTTCTGTGGGGGATTATTTGCTTTTAAATGAATGGGATAGCGGGGCTGATGAATATGCCGG GCGACAGGTTGCCGTGGCAATTACGGATATCACCCACGTGGATAGTCTTGCAGATAATTTAGTTTTGCTTTCATTTTATG ATCCATCTGACGAAATTCCATTTTAA
Upstream 100 bases:
>100_bases CCGGAACGCCTAAGGCAAAAATATTACGTAATTTATCTGATTGGATTTTTGAAAGTAAATTAATTGCTAATTCACCCACT GAAAACAAAGAGGTTAAATA
Downstream 100 bases:
>100_bases GGGGCTGTCATGAATTATTCCTCTAAAGAAATATTTATATCAGCTTATGCCGCAATGAATACACCTGATGACATAACATT ACGAAAATTAAATGATCTCA
Product: bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MATHINTANAIEGLTCAIDTFKYIEQYLNFKMKHPIQYLTNTITEIERLNDEAIRLRKRIKFLEEFNSSFESQWDDLIFA VMGTEAGKRICAEGADETTIRAVSAIRKTEFDRKEALCVAQAFQETAQSPIPAPAPKTHRLKILPEYFQSVIEGRKKAEL RVNDRDFSVGDYLLLNEWDSGADEYAGRQVAVAITDITHVDSLADNLVLLSFYDPSDEIPF
Sequences:
>Translated_221_residues MATHINTANAIEGLTCAIDTFKYIEQYLNFKMKHPIQYLTNTITEIERLNDEAIRLRKRIKFLEEFNSSFESQWDDLIFA VMGTEAGKRICAEGADETTIRAVSAIRKTEFDRKEALCVAQAFQETAQSPIPAPAPKTHRLKILPEYFQSVIEGRKKAEL RVNDRDFSVGDYLLLNEWDSGADEYAGRQVAVAITDITHVDSLADNLVLLSFYDPSDEIPF >Mature_220_residues ATHINTANAIEGLTCAIDTFKYIEQYLNFKMKHPIQYLTNTITEIERLNDEAIRLRKRIKFLEEFNSSFESQWDDLIFAV MGTEAGKRICAEGADETTIRAVSAIRKTEFDRKEALCVAQAFQETAQSPIPAPAPKTHRLKILPEYFQSVIEGRKKAELR VNDRDFSVGDYLLLNEWDSGADEYAGRQVAVAITDITHVDSLADNLVLLSFYDPSDEIPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25116; Mature: 24984
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHINTANAIEGLTCAIDTFKYIEQYLNFKMKHPIQYLTNTITEIERLNDEAIRLRKRI CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH KFLEEFNSSFESQWDDLIFAVMGTEAGKRICAEGADETTIRAVSAIRKTEFDRKEALCVA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHH QAFQETAQSPIPAPAPKTHRLKILPEYFQSVIEGRKKAELRVNDRDFSVGDYLLLNEWDS HHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHCCCHHCEEEECCCCCCCCCEEEEECCCC GADEYAGRQVAVAITDITHVDSLADNLVLLSFYDPSDEIPF CHHHHCCCEEEEEEEHHHHHHHHHCCEEEEEEECCCCCCCC >Mature Secondary Structure ATHINTANAIEGLTCAIDTFKYIEQYLNFKMKHPIQYLTNTITEIERLNDEAIRLRKRI CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH KFLEEFNSSFESQWDDLIFAVMGTEAGKRICAEGADETTIRAVSAIRKTEFDRKEALCVA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHH QAFQETAQSPIPAPAPKTHRLKILPEYFQSVIEGRKKAELRVNDRDFSVGDYLLLNEWDS HHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHCCCHHCEEEECCCCCCCCCEEEEECCCC GADEYAGRQVAVAITDITHVDSLADNLVLLSFYDPSDEIPF CHHHHCCCEEEEEEEHHHHHHHHHCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA