| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51597424
Identifier: 51597424
GI number: 51597424
Start: 3671798
End: 3672577
Strand: Reverse
Name: 51597424
Synonym: YPTB3111
Alternate gene names: NA
Gene position: 3672577-3671798 (Counterclockwise)
Preceding gene: 51597425
Following gene: 51597423
Centisome position: 77.4
GC content: 35.13
Gene sequence:
>780_bases ATGAAAAAGGTAAATTTACTGGTCTGGATAGGTTTATCACTAAACTTAGTGCTTGTTTTGGCCAGTTGGTTTTTCACTGT AGACTATCAGGAACTCTATGGTGAGTTAGGCTATAGAGATCGGATGTTGCTTGATGCTATCGCCGTATTGAGATACTACT TTGCTGTTAGTCTTGTATTGCAAATCCTTAGCGTGATTTTTCTAGATAAAGCCAATAAACTTTCATTTGGATTGGCCATT ATCTCTTGCCTGGGTATGTTACCCCTCAGTATTGTTTTCCTTATTGGTTATCTCTTTACCTATAACGATTACGTTTACCG TGGTTTAAAGACGTTTTCATTAAATGAAACGGGTAAGCTTGATACATATCTAAATTTTGCCACTGTTCGTTATTTTATGC TAGGTGCGTTTGCAACTGTAGCGGGTGTTTTTATGTTTTTCACTGATATGCCAATGAGTATGTTAATTATTGTCGTCGGT GTGTTGAATATGATAAATGGTATTCGGTTGGGGCCTCGCCCTGTGATTGCCTTAATGGGGGATAATCTGGTATTTACACC CGCGTTGATGTCGAATACTTATATTATCTCAATTGAGCACGTTGACCTGGTAGAAAGCAAAAAAGGTAAATTCAAGATTA AATTAAATTTAGAGGGATTAGAGAAAAAAATAACTTTCCAGAAAAATATAATGGAAAATGATAAAGATTCTAGTGCTCTT GAAAAAATACTTGCCAAAATTGAAAAAAATAACGGTGAAAAACAGCATATTTTCTTGTAA
Upstream 100 bases:
>100_bases TTACAATTAACACATATTAAAATAAGATGTGCTGGATAAATGGTGTAAATATGTACAATAAATAAAATAATATTATGTTT ATGAATTATAAGGGTAATTT
Downstream 100 bases:
>100_bases GAGATTGAAACGTTATTATTCGGTCAAGAGCGATGTCAATTTTGCATCAAATTATGGCGATACGGCATTGCTCTTACCCG TCTTAGATACGAAGGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVLQILSVIFLDKANKLSFGLAI ISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKLDTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVG VLNMINGIRLGPRPVIALMGDNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL EKILAKIEKNNGEKQHIFL
Sequences:
>Translated_259_residues MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVLQILSVIFLDKANKLSFGLAI ISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKLDTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVG VLNMINGIRLGPRPVIALMGDNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL EKILAKIEKNNGEKQHIFL >Mature_259_residues MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVLQILSVIFLDKANKLSFGLAI ISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKLDTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVG VLNMINGIRLGPRPVIALMGDNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL EKILAKIEKNNGEKQHIFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29382; Mature: 29382
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVL CCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH QILSVIFLDKANKLSFGLAIISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCH DTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVGVLNMINGIRLGPRPVIALMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC DNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL CCEEEEHHHHCCEEEEEEECEEHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHH EKILAKIEKNNGEKQHIFL HHHHHHHHHCCCCCEECCC >Mature Secondary Structure MKKVNLLVWIGLSLNLVLVLASWFFTVDYQELYGELGYRDRMLLDAIAVLRYYFAVSLVL CCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH QILSVIFLDKANKLSFGLAIISCLGMLPLSIVFLIGYLFTYNDYVYRGLKTFSLNETGKL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCH DTYLNFATVRYFMLGAFATVAGVFMFFTDMPMSMLIIVVGVLNMINGIRLGPRPVIALMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC DNLVFTPALMSNTYIISIEHVDLVESKKGKFKIKLNLEGLEKKITFQKNIMENDKDSSAL CCEEEEHHHHCCEEEEEEECEEHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHH EKILAKIEKNNGEKQHIFL HHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA