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The map label for this gene is ygaC [H]

Identifier: 51597268

GI number: 51597268

Start: 3485213

End: 3485548

Strand: Reverse

Name: ygaC [H]

Synonym: YPTB2953

Alternate gene names: 51597268

Gene position: 3485548-3485213 (Counterclockwise)

Preceding gene: 51597269

Following gene: 51597265

Centisome position: 73.46

GC content: 36.31

Gene sequence:

>336_bases
ATGTATCTGAGACCTGATGAAGTCGCTAAAGTTTTGGAAAATGCGGGTTTTGAACGTGTATATACAGTTAATGAAGCGTA
TGGTTATCAAAAGGGAAGGCATTATGTTTATGTTAATCGTGAATCCTATATGGGCCGAACAGCATTAATTATTCATCCAT
CTCAAAAAGATAAGAGCATTGGGTTGTCGATGCCTACAGCATTAATTAAAACTAGTAATAAATATATTGAATTCCCTCTC
TATTTGGTTGGTGCTATCGGTGAGTATTATGGTATTGCGCATGGTTTTAGTTCAAGAGAGTTGTTACTGAATTTCTTAGG
CCGGATGTTCGAATAG

Upstream 100 bases:

>100_bases
AGAAAAATCCTAAATATCTTAATGAAATGACAAATTTCTGTTTAATGTATGTTTTTAATGGGATAGTAAATTATAAGAAT
ACTTAAAATTAGGACAATTT

Downstream 100 bases:

>100_bases
CGCCATGATAAGGCTGACTGCCTATCTGATGTCGCGAGAAAATCAGATAATAATGCAGCCATATCCACGATGCTAATGGG
TAGGTAATAGAACATCACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MYLRPDEVAKVLENAGFERVYTVNEAYGYQKGRHYVYVNRESYMGRTALIIHPSQKDKSIGLSMPTALIKTSNKYIEFPL
YLVGAIGEYYGIAHGFSSRELLLNFLGRMFE

Sequences:

>Translated_111_residues
MYLRPDEVAKVLENAGFERVYTVNEAYGYQKGRHYVYVNRESYMGRTALIIHPSQKDKSIGLSMPTALIKTSNKYIEFPL
YLVGAIGEYYGIAHGFSSRELLLNFLGRMFE
>Mature_111_residues
MYLRPDEVAKVLENAGFERVYTVNEAYGYQKGRHYVYVNRESYMGRTALIIHPSQKDKSIGLSMPTALIKTSNKYIEFPL
YLVGAIGEYYGIAHGFSSRELLLNFLGRMFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789026, Length=110, Percent_Identity=56.3636363636364, Blast_Score=128, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018994 [H]

Pfam domain/function: PF09400 DUF2002 [H]

EC number: NA

Molecular weight: Translated: 12768; Mature: 12768

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLRPDEVAKVLENAGFERVYTVNEAYGYQKGRHYVYVNRESYMGRTALIIHPSQKDKSI
CCCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCC
GLSMPTALIKTSNKYIEFPLYLVGAIGEYYGIAHGFSSRELLLNFLGRMFE
CCCCCHHEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYLRPDEVAKVLENAGFERVYTVNEAYGYQKGRHYVYVNRESYMGRTALIIHPSQKDKSI
CCCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCC
GLSMPTALIKTSNKYIEFPLYLVGAIGEYYGIAHGFSSRELLLNFLGRMFE
CCCCCHHEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]