| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yicN
Identifier: 51597267
GI number: 51597267
Start: 3484666
End: 3485115
Strand: Direct
Name: yicN
Synonym: YPTB2952
Alternate gene names: 51597267
Gene position: 3484666-3485115 (Clockwise)
Preceding gene: 51597266
Following gene: 51597270
Centisome position: 73.44
GC content: 42.22
Gene sequence:
>450_bases ATGACGTGGATAATTATTGCTGTTTTGATCGTGGTTTTTATTGTGGGCTATCGTGTATTGACATCAGATACCCGCAAAGC TATCGATACAATCTCTAACCTACTGAAAATAAAACCGATTTATATTGAATCGATGTTGCAAGAGATGGGGCCACGCCAAA CGCAAATGTTTATTCGCTCCACCAGCAATGGCTCGGCAGAAGAGGTTAGAAAGGCAGCTTATTTAGTTTTTATTTATCAT ACTTTTATCAAAAACCCTTCGGATGAAAATGTGGAGCTGTGGCGAAATACCCTGATCCGCGCACAGATCTCCCCTATTCT GGCAGCAGAGCATACCGACGCCGCTTTGTTTTATTTTGCCGAACTGGATTTAGATGCCTTTGAATTGGCACAATTTCGGC GTCATTATAATCTGCATTTTAATCCAGAACCCGGCACCCTGCTTCATTAG
Upstream 100 bases:
>100_bases CAATTTAATAACTTATCGCAATTTAACAACTTATGGAAATTTAATAAGCCGATAGATTTACATTGCTAAATTCATCTTCT ATGGCGTAAAGAAACCTTAA
Downstream 100 bases:
>100_bases TGATGTTCTATTACCTACCCATTAGCATCGTGGATATGGCTGCATTATTATCTGATTTTCTCGCGACATCAGATAGGCAG TCAGCCTTATCATGGCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYH TFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
Sequences:
>Translated_149_residues MTWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYH TFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH >Mature_148_residues TWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHT FIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082308, Length=146, Percent_Identity=32.1917808219178, Blast_Score=89, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009587 - ProDom: PD093913 [H]
Pfam domain/function: PF06711 DUF1198 [H]
EC number: NA
Molecular weight: Translated: 17229; Mature: 17098
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHEEC TSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE ELDLDAFELAQFRRHYNLHFNPEPGTLLH ECCCCHHHHHHHHHHCCCEECCCCCCCCC >Mature Secondary Structure TWIIIAVLIVVFIVGYRVLTSDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHEEC TSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE ELDLDAFELAQFRRHYNLHFNPEPGTLLH ECCCCHHHHHHHHHHCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]