| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51597237
Identifier: 51597237
GI number: 51597237
Start: 3455316
End: 3455744
Strand: Direct
Name: 51597237
Synonym: YPTB2921
Alternate gene names: NA
Gene position: 3455316-3455744 (Clockwise)
Preceding gene: 51597236
Following gene: 51597241
Centisome position: 72.83
GC content: 50.82
Gene sequence:
>429_bases ATGAGCACTTGGTTAATTTACGCCCTGCTGTCTGCCTTGAGTGCCTCGCTGGTGGCAATCTTCGGTAAAATCGGTCTGCA GCATTTAGATGCTAATACCGCCACCGCTGTACGGGCGGTGGTGATGGCGCTATTTTTAGTCGGCGTGGTCGTGGTTCAGG GGAAATTTAATCTGGTGGGTACCGTGCTGGCCGATAAAAAAGCCCTGTTGTTTATCGTACTGAGTGGCGTTGCGGGGGCT TTATCCTGGCTGTTCTACTTTATGGCCATTAAAAATGGCACGGTTTCGCAAGTGGCTCCCATTGATAAACTCAGTGTGGT GTTTGCCGTGCTCTTGGCGTTTATTCTGTTTGGCGAAAAAATCTCATTAGTTGCCGGGCTAGGCGTAGCACTGATTACTG CCGGCGCATTGATGGTGGCTCTGGGGTAA
Upstream 100 bases:
>100_bases CCCTAAGGTTTTTTCAATGCCAGACTGCTGATTAGGGCTAGGAAAATGAAACTCAGCGGCGTAGCATCCTATTTTTGAAT GCTAATAGGTCTTATTTGTT
Downstream 100 bases:
>100_bases TACCCTCCCCAAAAACATAATTAATTAAACCACCGCCCATTGATATTATTAAATTAATCTTAGATGACCGCCTGAGCGGT CATTTTTAATTGCGCCAAAT
Product: BAT family (DMT superfamily) transporter
Products: NA
Alternate protein names: ORF6 [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSTWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVGTVLADKKALLFIVLSGVAGA LSWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEKISLVAGLGVALITAGALMVALG
Sequences:
>Translated_142_residues MSTWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVGTVLADKKALLFIVLSGVAGA LSWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEKISLVAGLGVALITAGALMVALG >Mature_141_residues STWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVGTVLADKKALLFIVLSGVAGAL SWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEKISLVAGLGVALITAGALMVALG
Specific function: Unknown
COG id: COG2510
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 14680; Mature: 14549
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TVLADKKALLFIVLSGVAGALSWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCH ISLVAGLGVALITAGALMVALG HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TVLADKKALLFIVLSGVAGALSWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCH ISLVAGLGVALITAGALMVALG HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1655697 [H]