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The map label for this gene is cpdP [H]

Identifier: 51597228

GI number: 51597228

Start: 3442435

End: 3443472

Strand: Reverse

Name: cpdP [H]

Synonym: YPTB2912

Alternate gene names: 51597228

Gene position: 3443472-3442435 (Counterclockwise)

Preceding gene: 51597229

Following gene: 51597227

Centisome position: 72.58

GC content: 47.01

Gene sequence:

>1038_bases
ATGTTATTGAAATATCTCTCGATTAAATCTGCATCAGATAAGATAAAGAGTGGTCTGCTAAAGACGGGCGTGATTTTATC
TTTCAGTCTCTTCAGTTCACTGTCCACTGCGGCTTTTGAGGTCGTGGCGCTTGGCGTTGATGGGGGTGTCAGTGATGGTA
ATCTGACCTCTTATCTGATTCGCAATGATAGCCAGCCGCTGTATTTGGGGCTGGATGCCGGTTCCGTGTTGCCAGGGATC
GCTCGTGCCTTGGAGAAAGGCCATTTTGCAGCGATCACCGATGCCATGGCCGCTCCGCTAACCCGGCAGGGCTATATTTT
TCGCCAGAGCATTAACAGTTATTTTATTAGCCATGCGCATTTAGATCATGTCTCTGGCCTGATTATCGGTTCACCGGATG
ACAGCAAGAAAACCATTTATGCTTCGGCTGATACCATTGATGTGCTGAGAAACTACTATTTTAACTGGCGCGTTTGGCCC
AATTTTACCGACAGCGGCAGTGGGGCTCGTTTAGGGACTTACCGTATGCAAGTGGTGCGCCCGGCTCAGTCTTTGAGCTT
GGGGTTGACCCGCTTAACGGGGGAAATGTATCCACTGAGTCATGATAAATCGCCCTCATCCATGCTGCTTATCAGTAGTA
ATAATGAGTTCTTTGCCTATTTCGGTGATACCGGCCCGGATGATGTCGAAAAATCCAAAAATCTGGATACGGTCTGGCGC
AAACTGGCGGAGAAGGTTACACAACAACAACTGAAAGGGATGATTATTGAGGTCTCGTATCCTAATGATGTGGCAGACAA
TAAGTTGTTTGGCCACATGACACCAACGTGGTTGTTGAAAGAATTGAAAAAACTGGAGCAATACAGTGGGGAAGGCCAGC
CACTAAAAGGATTACCGGTGGTGATTAGCCACATAAAACCCTCATTCCAGCAGGGGCAGGATGTGCGTAAATTAATTCTC
TCTGAGTTGCAACAAGGCAATGATATGGGAATCGAATTTATCCTGATGGAACAAGGTGATAGCCAGAAATTCCAGTGA

Upstream 100 bases:

>100_bases
TCCCGTTGGTTGATCACAAGCAAGCCAGATTGGCTACACTCGCGGCATTTGAAGCCGCTAAGCGGGATAGCACAAGGATC
CCTAATCGCAAGGAGCCTTC

Downstream 100 bases:

>100_bases
CTTATGGTTGGCTTTTCTTTTATAGGATGAAAATAGCTAGGTGACAAAAATAGCTAGGTGACAAAAATAGCTAGGTGACA
AAAATAGCTAGGTGACAAAA

Product: 3',5'-cyclic-nucleotide phosphodiesterase

Products: NA

Alternate protein names: 3':5'-CNP; PDEase [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MLLKYLSIKSASDKIKSGLLKTGVILSFSLFSSLSTAAFEVVALGVDGGVSDGNLTSYLIRNDSQPLYLGLDAGSVLPGI
ARALEKGHFAAITDAMAAPLTRQGYIFRQSINSYFISHAHLDHVSGLIIGSPDDSKKTIYASADTIDVLRNYYFNWRVWP
NFTDSGSGARLGTYRMQVVRPAQSLSLGLTRLTGEMYPLSHDKSPSSMLLISSNNEFFAYFGDTGPDDVEKSKNLDTVWR
KLAEKVTQQQLKGMIIEVSYPNDVADNKLFGHMTPTWLLKELKKLEQYSGEGQPLKGLPVVISHIKPSFQQGQDVRKLIL
SELQQGNDMGIEFILMEQGDSQKFQ

Sequences:

>Translated_345_residues
MLLKYLSIKSASDKIKSGLLKTGVILSFSLFSSLSTAAFEVVALGVDGGVSDGNLTSYLIRNDSQPLYLGLDAGSVLPGI
ARALEKGHFAAITDAMAAPLTRQGYIFRQSINSYFISHAHLDHVSGLIIGSPDDSKKTIYASADTIDVLRNYYFNWRVWP
NFTDSGSGARLGTYRMQVVRPAQSLSLGLTRLTGEMYPLSHDKSPSSMLLISSNNEFFAYFGDTGPDDVEKSKNLDTVWR
KLAEKVTQQQLKGMIIEVSYPNDVADNKLFGHMTPTWLLKELKKLEQYSGEGQPLKGLPVVISHIKPSFQQGQDVRKLIL
SELQQGNDMGIEFILMEQGDSQKFQ
>Mature_345_residues
MLLKYLSIKSASDKIKSGLLKTGVILSFSLFSSLSTAAFEVVALGVDGGVSDGNLTSYLIRNDSQPLYLGLDAGSVLPGI
ARALEKGHFAAITDAMAAPLTRQGYIFRQSINSYFISHAHLDHVSGLIIGSPDDSKKTIYASADTIDVLRNYYFNWRVWP
NFTDSGSGARLGTYRMQVVRPAQSLSLGLTRLTGEMYPLSHDKSPSSMLLISSNNEFFAYFGDTGPDDVEKSKNLDTVWR
KLAEKVTQQQLKGMIIEVSYPNDVADNKLFGHMTPTWLLKELKKLEQYSGEGQPLKGLPVVISHIKPSFQQGQDVRKLIL
SELQQGNDMGIEFILMEQGDSQKFQ

Specific function: Unknown

COG id: COG5212

COG function: function code T; Low-affinity cAMP phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cAMP phosphodiesterase class-II family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321189, Length=304, Percent_Identity=25.9868421052632, Blast_Score=105, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000396 [H]

Pfam domain/function: PF02112 PDEase_II [H]

EC number: =3.1.4.17 [H]

Molecular weight: Translated: 38101; Mature: 38101

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00607 PDEASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKYLSIKSASDKIKSGLLKTGVILSFSLFSSLSTAAFEVVALGVDGGVSDGNLTSYLI
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEEE
RNDSQPLYLGLDAGSVLPGIARALEKGHFAAITDAMAAPLTRQGYIFRQSINSYFISHAH
ECCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LDHVSGLIIGSPDDSKKTIYASADTIDVLRNYYFNWRVWPNFTDSGSGARLGTYRMQVVR
HHHHCEEEEECCCCCCEEEEECCHHHHHHHHCEEEEEECCCCCCCCCCCEEEHEEEEEEC
PAQSLSLGLTRLTGEMYPLSHDKSPSSMLLISSNNEFFAYFGDTGPDDVEKSKNLDTVWR
CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHCCCHHHHHH
KLAEKVTQQQLKGMIIEVSYPNDVADNKLFGHMTPTWLLKELKKLEQYSGEGQPLKGLPV
HHHHHHHHHHHCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHH
VISHIKPSFQQGQDVRKLILSELQQGNDMGIEFILMEQGDSQKFQ
HHHHCCCCHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MLLKYLSIKSASDKIKSGLLKTGVILSFSLFSSLSTAAFEVVALGVDGGVSDGNLTSYLI
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEEE
RNDSQPLYLGLDAGSVLPGIARALEKGHFAAITDAMAAPLTRQGYIFRQSINSYFISHAH
ECCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LDHVSGLIIGSPDDSKKTIYASADTIDVLRNYYFNWRVWPNFTDSGSGARLGTYRMQVVR
HHHHCEEEEECCCCCCEEEEECCHHHHHHHHCEEEEEECCCCCCCCCCCEEEHEEEEEEC
PAQSLSLGLTRLTGEMYPLSHDKSPSSMLLISSNNEFFAYFGDTGPDDVEKSKNLDTVWR
CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHCCCHHHHHH
KLAEKVTQQQLKGMIIEVSYPNDVADNKLFGHMTPTWLLKELKKLEQYSGEGQPLKGLPV
HHHHHHHHHHHCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHH
VISHIKPSFQQGQDVRKLILSELQQGNDMGIEFILMEQGDSQKFQ
HHHHCCCCHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]