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The map label for this gene is ybgL [C]

Identifier: 51597224

GI number: 51597224

Start: 3438562

End: 3439338

Strand: Reverse

Name: ybgL [C]

Synonym: YPTB2908

Alternate gene names: 51597224

Gene position: 3439338-3438562 (Counterclockwise)

Preceding gene: 51597225

Following gene: 51597223

Centisome position: 72.49

GC content: 53.67

Gene sequence:

>777_bases
ATGGGGTTTAGAGAAGGGTTTTGTTACCCCGGAGGCCCAGTGAAAATTGATTTAAATGCTGATTTGGGTGAGGGCTGCGC
CAATGATCAGGCGCTGCTGCAATTGGTCAGTTCGGCCAACATAGCCTGCGGTTTTCATGCAGGTGATGCGCAAACTATGC
GTCAATCGGTACGCTGGGCGTTGGAGTATGGTGTGGCTATTGGTGCACATCCGAGCTTCCCGGATCGGGAAAACTTTGGT
CGCACTGCTATGCAGCTACCACCTGAGACCGTCTATGCTCAAGTGGTTTATCAATTGGGCGCGCTTGCCGCCATCGTGCA
GGTTGAAGGGGGGGTTATGCAGCACGTAAAACCCCATGGCATGTTGTATAACCAAGCGGCGGTCGATCCGTTATTGGCGG
ATGCCATTGCTCAGGCGGTTAAGGCTGTGGATCCGTCATTACGTCTGGTCGGGTTAGCCGGGAGTGAGTTGATCCGCGCC
GGTACCCGTGTGGGGTTAGTCACCCGGCAGGAAGTGTTTGCTGATCGCCACTATCAACCCGATGGCACGTTAGTTCCTCG
CAGTCAGCCAGATGCTCTAATAGAAAGTGACGAGTTAGCGCTGTCACAAACTCTGGCTATGGTGCAACAGCATCAGGTTC
AGGCCTGCGATGGCAGTTGGGTACAGGTACAAGCTGATACGGTATGTGTTCATGGCGATGGCGTACAGGCATTAGCGTTT
GCGCGTTGTTTACGAGACCGTTTTCAGCAGGAAGGCATCAGCGTGATAGCGCAATAA

Upstream 100 bases:

>100_bases
CGCAAATTCGGCTGGGTGAGCCGATACATTTTGTACCATGTACTGTGGAAGAAGCACTACGCGCCAAAAGAGAGCAACAG
CATTTCCTACAGCAAATTGA

Downstream 100 bases:

>100_bases
CCAGCGCCTACCTCGGGCAGAATATATTTATCACTTAAATACGTTTTACATTATTGAAATAGACTTCAGGGCGGGAGAAT
TCTCTTGGAACAAACGGTAA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MGFREGFCYPGGPVKIDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWALEYGVAIGAHPSFPDRENFG
RTAMQLPPETVYAQVVYQLGALAAIVQVEGGVMQHVKPHGMLYNQAAVDPLLADAIAQAVKAVDPSLRLVGLAGSELIRA
GTRVGLVTRQEVFADRHYQPDGTLVPRSQPDALIESDELALSQTLAMVQQHQVQACDGSWVQVQADTVCVHGDGVQALAF
ARCLRDRFQQEGISVIAQ

Sequences:

>Translated_258_residues
MGFREGFCYPGGPVKIDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWALEYGVAIGAHPSFPDRENFG
RTAMQLPPETVYAQVVYQLGALAAIVQVEGGVMQHVKPHGMLYNQAAVDPLLADAIAQAVKAVDPSLRLVGLAGSELIRA
GTRVGLVTRQEVFADRHYQPDGTLVPRSQPDALIESDELALSQTLAMVQQHQVQACDGSWVQVQADTVCVHGDGVQALAF
ARCLRDRFQQEGISVIAQ
>Mature_257_residues
GFREGFCYPGGPVKIDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWALEYGVAIGAHPSFPDRENFGR
TAMQLPPETVYAQVVYQLGALAAIVQVEGGVMQHVKPHGMLYNQAAVDPLLADAIAQAVKAVDPSLRLVGLAGSELIRAG
TRVGLVTRQEVFADRHYQPDGTLVPRSQPDALIESDELALSQTLAMVQQHQVQACDGSWVQVQADTVCVHGDGVQALAFA
RCLRDRFQQEGISVIAQ

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=71.3114754098361, Blast_Score=349, Evalue=8e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27649; Mature: 27518

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFREGFCYPGGPVKIDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWA
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
LEYGVAIGAHPSFPDRENFGRTAMQLPPETVYAQVVYQLGALAAIVQVEGGVMQHVKPHG
HHHCEEECCCCCCCCCHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
MLYNQAAVDPLLADAIAQAVKAVDPSLRLVGLAGSELIRAGTRVGLVTRQEVFADRHYQP
EEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCHHCEEEHHHHHHCCCCCC
DGTLVPRSQPDALIESDELALSQTLAMVQQHQVQACDGSWVQVQADTVCVHGDGVQALAF
CCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHH
ARCLRDRFQQEGISVIAQ
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GFREGFCYPGGPVKIDLNADLGEGCANDQALLQLVSSANIACGFHAGDAQTMRQSVRWA
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
LEYGVAIGAHPSFPDRENFGRTAMQLPPETVYAQVVYQLGALAAIVQVEGGVMQHVKPHG
HHHCEEECCCCCCCCCHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
MLYNQAAVDPLLADAIAQAVKAVDPSLRLVGLAGSELIRAGTRVGLVTRQEVFADRHYQP
EEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCHHCEEEHHHHHHCCCCCC
DGTLVPRSQPDALIESDELALSQTLAMVQQHQVQACDGSWVQVQADTVCVHGDGVQALAF
CCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHH
ARCLRDRFQQEGISVIAQ
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA